| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2374 |
|---|
| Symbol | |
|---|
| ID | 8225946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 2930286 |
|---|
| End bp | 2933192 |
|---|
| Gene Length | 2907 bp |
|---|
| Protein Length | 968 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644930206 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003086757 |
|---|
| Protein GI | 255036136 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3893] Inactivated superfamily I helicase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCAT TCCTGAACCT CATAGCCAAA CGCATTCTCG CCAACCATAC CTCGCTCGAT
CGCGTGCAGA TCGTGGTGCC GACGCGGCGG GCGGCATTTT TTCTGATGCG GGAAATGGCC
GGCGAAACAA CCGAGCCGCT CATGAGCCCG GGCATTATGG CCATCGACGA TTTTGTGGAA
AGCATCTGCC GACTCGAAAT CGAGGACCCG GTGCATTTGC TGTTCGATCT GTACGAAACA
TTCCGGGAAA TAGACCCCGA CGTGCAGTTC GACCGGTTTA TGGGCTGGGC TTCGGTGCTG
CTGAGCGACC TCGATAAGAT CGATCAGTAC CTGGTGAAAA CCGATTTCCT GTTCGAATAC
CTTTCGGAAG CGCATGCGCT TTCGCGCTGG CAGGAAAGCT TGCCCGAAGG CCGGTCGCTC
AACAGCGAGG GCGGTTCGAG GCAGTATTTC TCGCTGTTTG AGAACATCCA TCAGGTGTAC
CGGTCGTTCA GGCAGCGGCT GCTGGCCAAG GGGAAAGCCT ACCGGGGCAT GGCCTACCGC
GAGCTGGCGA CGGACATTGC CAACCTCTCC GCCGATCTCC CCGAGATGGA ACGGATTTAT
TTTGCCGGTT TCAATGCATT CACAACTTCC GAACGGGTGA TCGTGACGGC CCTGGTGAAG
GCCAAAAAGG CCGAGGTACT ATGGGATTCG GACCGGTATT ATATGTCGGA AAATACGGTG
GTGGAAGCCG GGAAAAGCCT GCGCGAATAC CAGCGGAGCA AGGAGTTCGG TGAATGGAAC
TGGACCGGCG ACGAACTGCT GTCTACCGAA AAGCACATTA CCCTTTACGG CGTTCCCAAT
GCCACGCTTC AAACCAAGGT AGCCGGAGAG CTTTACCAGC GCATGAAACG CTTCGAAGCG
GAAGACGCGC CCGTGCCTAC GGCCATTGTA CTGGCCGACG AAAACCTGCT CCTTCCAATG
CTCTATTCGC TGGACGAAGA AGTGCGGGAT CTGAACGTGA CCATGGGGCT ATCCATGCGA
AATTCGCTGC TTTACACGCT GGTGGACGGC ATTTTTGAGT TGCAGCAGAA TGTAGTCGAG
CTCCGCAGCA GGAGCGGCAA ACTGATCCGC ATTCCGAAAT TCGGGCATAA GTCGGTGGAC
AAAATCCTTA ACCACCCGTT TATCCGGCAT TACGAACACG TAGCGCTCAC GCCGCTGGAA
GACGGCCAAA CGATCATTCA GCGAACCCTG CGCGAGATTA CCGAAGGCAA CCAGGTGTTC
CTGAGCTCGG AGGAACTGGT AACATTGGGC GATAACCACC CGCTTTTTCA GATCCTTTTC
ACGCATTGGC AGAAAAACAA TGCACAGCAG GTGATCCGCT CGTTTTACCA GCTGATCGAG
CTGTTGCGGG AGGTTTACAA GGATTACAAG AATGCCCTGG AAACGGAATA CCTCTATTTG
TTTTACACCT TACTCAAACA ATTCGAACAG ACTATCGAGG AGCGCGCCGA GCTGATCACG
CTGCGGACGC TGAAATCGTT TATGTTCGAA CTGATCCGCC AGACGCGCAT TCCATTCAGC
GGGGAGCCGG TGAGCAACCT GCAAATTATG GGAATGCTCG AAACAAGGGC ACTGGACTTC
GAGCGGATCA TTATTCTATC TGTCAACGAA GGTGTGATAC CGCAGGCGAA GCGACAAAAC
TCGCTGATCC CGTTCGACGC CGCGCAGGCT GTGGGCCTGC CTACGCACCA GCACCAGGAG
GCGGTCATGT CGTACCATTT TTACCGGCTG CTCCAACGCG CTTCTGAGGT GCATATATTG
TACACCAGCA CCAACGACGC GCCCGGCGGC GGCGAGAAGA GCCGTTTTGT GCGGCAAATC
GAATATGAGC TCGCGCAATA CAACCCGCTG ATCCGCATCG AGAACAAAAC CGTGGTTTTC
GAAGCCCAGG CCCGGCAGGA GCTCGAAGAA GTGGTGCACA AAGACGACGC CCTCATTGCT
GCCATCCGCG CTTATCTCGA CGGAAAAGGC ATTTACCCAA CGCATTTGAA TGAGTTTATC
CGCTGCTCCA TGCAGTTTTA CCTCAAACAC ATTGCCGGCG TGAAGGAAAA AGAGGAAGTA
GAGGAAGAGC TCGGAATGGA CAAAATCGGG ACCTGGCTGC ACGCTTCGCT GGAACGCCTG
GACCTGGAAT TTTTCCTGCT GGACAAAGAT CCATCCGAAG AAGAGATCGT GCAGGTGCTG
CGCGAGGAAT TCGACCGGCT GTTCAAAGGC TATGTTACCA ACCTGGGTCT CAACCGCATT
TACTACCAGA TCGGCGAACA GCAAATCCTG ACCTTCCTGC GCCACCACAT GGCGCAAAAG
CCCCGCCGGC AAATCCTGGC CGCCGAGCAG CCGCTGCACA CGCGCATTCA GCTCGTGCTG
CAAGGCGCGT TCACACCCGT GCGCCTGGGC GGGAAAATCG ACCGTATCGA GCTGGGGGAA
GACGGCATAT TGTATGTGAT GGATTACAAA ACCGGCAGCG TGGAGCTGAC GGGCAAGCAA
AAACTGGCCG ATCCTGTGGC CCGGGAGGAA GTAATCCGCG CCGACCCGGA CCGCAAAATG
GGTTACGTCC GCCAGCTCTG GATTTACGAA TACCTGATGT ACCGCAGGAT GAAGGAGGAA
AATGGATTGA AACTACGCGG CAACACGTAC AATTTCGGCG AATATGCAGT CAAATCGGGC
TTCTATTCCT TCCGCGACCC TAAAAACCTG ATCGCCAACC CGCTTGAACT TACCGACCAG
CTGGCCCCAG GAGAGTTTAT CGAAAAATCG GAAGTGATCC TGACTGACAT CCTGAATGTA
ATGCTCGATC CCGATGTGCC CTTCCGCAAA ACGGACGACC TTACTACCTG CAAATTTTGC
GATTTCACCG GCATTTGCGG GCGGTAA
|
|---|
| Protein sequence | MPSFLNLIAK RILANHTSLD RVQIVVPTRR AAFFLMREMA GETTEPLMSP GIMAIDDFVE
SICRLEIEDP VHLLFDLYET FREIDPDVQF DRFMGWASVL LSDLDKIDQY LVKTDFLFEY
LSEAHALSRW QESLPEGRSL NSEGGSRQYF SLFENIHQVY RSFRQRLLAK GKAYRGMAYR
ELATDIANLS ADLPEMERIY FAGFNAFTTS ERVIVTALVK AKKAEVLWDS DRYYMSENTV
VEAGKSLREY QRSKEFGEWN WTGDELLSTE KHITLYGVPN ATLQTKVAGE LYQRMKRFEA
EDAPVPTAIV LADENLLLPM LYSLDEEVRD LNVTMGLSMR NSLLYTLVDG IFELQQNVVE
LRSRSGKLIR IPKFGHKSVD KILNHPFIRH YEHVALTPLE DGQTIIQRTL REITEGNQVF
LSSEELVTLG DNHPLFQILF THWQKNNAQQ VIRSFYQLIE LLREVYKDYK NALETEYLYL
FYTLLKQFEQ TIEERAELIT LRTLKSFMFE LIRQTRIPFS GEPVSNLQIM GMLETRALDF
ERIIILSVNE GVIPQAKRQN SLIPFDAAQA VGLPTHQHQE AVMSYHFYRL LQRASEVHIL
YTSTNDAPGG GEKSRFVRQI EYELAQYNPL IRIENKTVVF EAQARQELEE VVHKDDALIA
AIRAYLDGKG IYPTHLNEFI RCSMQFYLKH IAGVKEKEEV EEELGMDKIG TWLHASLERL
DLEFFLLDKD PSEEEIVQVL REEFDRLFKG YVTNLGLNRI YYQIGEQQIL TFLRHHMAQK
PRRQILAAEQ PLHTRIQLVL QGAFTPVRLG GKIDRIELGE DGILYVMDYK TGSVELTGKQ
KLADPVAREE VIRADPDRKM GYVRQLWIYE YLMYRRMKEE NGLKLRGNTY NFGEYAVKSG
FYSFRDPKNL IANPLELTDQ LAPGEFIEKS EVILTDILNV MLDPDVPFRK TDDLTTCKFC
DFTGICGR
|
|---|
| |