Gene Dfer_2339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2339 
Symbol 
ID8225911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2892450 
End bp2893133 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content53% 
IMG OID644930172 
Producthypothetical protein 
Protein accessionYP_003086723 
Protein GI255036102 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000618869 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCTG CGGCTACCAT TGCATCTGCG CAAGTAAAAA TCGGATCGAA CCCTACAACG 
ATCGACCCGA GCAACAACCT GGAAGTGGAA AGCACTGACC CGGCCAAAAG AGTCAGTATA
AATAAAAATA CTGGCAAGGT CACTATTGCC GACGGTTCAC AGGGAAACGG CTTTGTGCTT
ACATCTGATG CGAATGGAGT CGCCACATGG CTGCCACTTT CAACGGCAAA AATACCTCAG
ACGGTATTCA ATGGAGCGAT TACTGCGCCT ACGACTGTAC CTACGTTTAC GGTACACGAC
GATCCCGCGC AGCGTCTGCC CCTGGTCCCA AGTGTCGGCG GTGAGAATTG GCTGCCTGCC
GAAAAACGGT ACACAATTCC TGCTGATGGC TCGTACTCAG TGCAGGTGGG TTTGTCGTGT
AACAGTACTA CGGGTGCAGG GGTAGTTCTT TGGACCAGGA TCTGGGTTGT CTCGGAAAAC
GGGGGCCCGC TTTTCAAAGG CACATCTCCG TTGGGAGGCA CTGCGGGTGA CTGGCAGTCT
GTCGTATATA CAGGAAGGTT ATCAGCGGGG GACGCAATTT CACTGGAAGG GTATACGATG
CAAACCGACG GGAACCCGCC CATTAACCCT ATCTGGACTG GGACATGTGG CCGCGCTTAT
ATGACGATCA CCAAAATAGA GTAG
 
Protein sequence
MLAAATIASA QVKIGSNPTT IDPSNNLEVE STDPAKRVSI NKNTGKVTIA DGSQGNGFVL 
TSDANGVATW LPLSTAKIPQ TVFNGAITAP TTVPTFTVHD DPAQRLPLVP SVGGENWLPA
EKRYTIPADG SYSVQVGLSC NSTTGAGVVL WTRIWVVSEN GGPLFKGTSP LGGTAGDWQS
VVYTGRLSAG DAISLEGYTM QTDGNPPINP IWTGTCGRAY MTITKIE