| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2283 |
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| Symbol | |
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| ID | 8225855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2815205 |
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| End bp | 2819095 |
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| Gene Length | 3891 bp |
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| Protein Length | 1296 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644930118 |
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| Product | polymorphic outer membrane protein |
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| Protein accession | YP_003086669 |
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| Protein GI | 255036048 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC AGCTACGCTT TCTATTCTTT CTACTTTGTT TTCCGCTGTC AATTGCTGCA
CAGATTTCGG GCGATGTTAA CGGGGTCGTG TATGTGATGC CCTCTGCCAT GGGAACCGGC
GACGGCAGTT CCTGGGCCAA TGCCGCGGGC AGTCTGGCAA CCGTACTTCA GGAGGCCCAT
ACCAATACCG CTATCGAGCA GGTTTGGGTG GCGGCAGGCA CCTACTATCC GTCTTCCACC
AACAACCGCG ATGATTTTTT TCGTGTCAGA AGAAGCAATT TAAAGCTGTA CGGCGGCTTT
GCTGGCGACG AAACATCGCT CAGCCAGCGG GATTGGGCAG CCAACAAGAC GATACTCAGC
GGGAATATCG GCGACGCAGC CAGTAGCGAG GATAACAGTT ATCATATCAT GGTCGTCAGC
ATTGACGAAA CACAAACTGC ACCATTCAGT CCGGTAGATA ATTCGACGGT GATCGATGGC
TTCGAATTCA GTGATGGTAA CGCCAATGCC GGTTCGGTGT TGAACAACCT CTTCCCGCGC
CACAGCGGCA GCGCCATGAT GATCACCACC TGGGGCGAAG ATGTGAGCTG TACGCCAGCC
ATCCGCAACT GCGTTTTTAA AAACAACCAG GCATTTCAAA CAGGGGCAGT TTACATTGAC
GCTGCCGCCA AACAGGGTGC TACGGATACG TTACGGATTG CAGACTGCCA CTTCGAAAAC
AACCTTGCAG AATACCAGGG AGGCGGTTTG GCGCTTTTTA ACCTGGCAGA TATTGGTTAC
GATGGTACAA ATGCGTTTTA CAATGTAAAG GTCACTAATA CCGAATTCGT CGGTCAAAGC
GCAAATAACG ACTCGCAGGG CGGCCCAGCC GGCGGCATCG GCGGGGGAGT GGCGGCGACG
GGACGCGGCT ACCTGCGGCT GGATGCCTGC ACTTTTCGCA ATAACACCAG CACCAATGAT
GGTGCGGCAA TAGGCTTGCG CAACGGTGCA AAAGTCGCTG TGACCAATAG TTTGTTGTAC
AACGTGTCCA GCAATAAGCC GGTAATTTAT GCAGCCGGAA AAAGCGAATT GATACCCGAC
CTGAAAGTTT ACAACACCAC GCTATATAAT CCTGACGGCA CGGTGCTGAA AGTGCAGGAT
AATGTAATTA CCGGGCTGAT CAACAGTATA TTGTGGACCG ATGGTGCTGC CGATGCCATT
ACGGTAGCAG GCAGCGCGGC AACGGGAACG GCCGCTAACT CGCTGATCAA AACCACCGAT
GTTAACAATC CCGCCAGCGG TTTTAGCGCG TCGGCGGTGA TCAGCGCCGC GCCGGGATTC
GTGAGTGTAG CGGCTAGCGA TTTCAGGCCA TCGGCCATGT CCCCGGTCAT TAATCAGGGA
AACAGCAGCC TTAACACTTT TGCGCTTGCG AGAGATCTGT CGGGAGGTCC CCGGGTAGTA
GGAAGTGCGA TCGATATGGG GGCTTACGAA TACCGGAACA AGTACTTTGT GGACGCCACA
GCCAGCGGCG CCAACAACGG CAGCACCTGG GCCGATGCCT ACACCGATCT GCAAACGGCG
ATCGACCATG CCGCTTTCGG CGACAGCCTG TTTGTGAAAA AGGGTGTTTA TAGCCTGACG
GCCACGATCA GTATGAAAGA CAGTGTGAAG ATTTACGGCA GTTTTGCCGG TACGGAGGAG
TACCTGTCGC AAAGGGTTTT TGGCGCTGAT AGCAGCATAC TGCTTCGCCC CGCCACCGCA
ACTAGCAATT TTCGCATCGT TACCAATCAT TTTTCGGAGG CCAATCCCAT GACCGACGAG
GCCGTCCTCG ATGGTTTTGT ACTCCGTGGT GGCCATCTCA TCGGAAACAC CAACCTCGAT
CGGGGCGGCG GCATGTCCAA CCGCTATGCT TCACCCACAT TAAGCAACCT TATCATCACT
TCTAACCGCA CCGAAGCATA TGGCGGCGGA ATGTACAATG GCGCGAGCAC TTCGGTCCTG
ACCAACGTAG TGATTACCGG GAATGTAGCC AGTGACCGTG GCGGTGGAAT CGCCAATCTC
CGTAGTAACC CCACCCTGAA CAATGTGACC ATCAGCAGAA ATACAGGCCC CAACTGGGGA
GGAGGTATAT ATAATGAGAA CAGCAGCCCG ATGCTTAACC AGGTAATGAT CAGCGAAAAC
AATGCGATAG ATCGTGGAGG AGGCATATTT GGTACCACAA ATTGCAGCCC CGTGCTCAGC
AACGTGGTCA TTAAAGGAAA CTACCTCACC GGCCAGAACG GTGCCGGGCA ACCCATGCGC
TTCGGCGGAG GCATGCATAA CGAAGTCAAT TGTCATCCTG TACTCACCAA TGTACTCATT
AGCGGCAACA GTGCCTATAA CTTTGGAGGC GGTATATCCA ATATTGTCAA TTCCAAACCC
GTGCTCACCA ACGTAACCAT CAGCGGCAAC AGCGCCTACG CCTACGGCGG GGGCATCTAT
AATGATAGCA GCAGCCCCGA AATCCGCAAC AGCATTATTT TGGGGAACAG CGCCACTTAT
TACAATGGCA TTTACAATGT AACCAATTCT GTCCCCGTCA TCGCTTTTAG CCTTATAGAA
GAACTCACCA ATACCGATAA CGGCAACATC AGCAGCAAGA AAATAGATGG CGCAGATATA
ACAGCTTCCG AGGTATTCGC AAATCCCGAC AATAGTGCAA CTTACACGAC ACCTTCCATG
GCAGGCGATT ATCACCTGAT CACATGCAGC CCGGCTGTCA ATGCAGGTGA CCCGGCATCG
ACAGCCGCTC CAACCGACAT CACCGGCTAC ACGCGCGTGG GTACTTACGA CCTGGGCGCT
TATGAATACC AGGGGCCGGT AGGAGCCGCT GCGTTGGCTG CACATGGGGC AACGTCCGTC
TCCACCCAGC AGGGTACGGT ATACTACGGC GCGTGCCCGG AGGTGATCGC CCGGGTAAGC
AGCAACACCA CGGACGGTGC AAGCGGCAGC ACCACTGCCA AACTGTGGAT CGAAAGCACC
CAGCCGGCAC AGTATGTGAA GCGCCACTAT GAGATCACCC CAGCCACCAA CGGATCAGGG
CAGGTGACGC TCTATTTCAC CCAGGAAGAG TTTGACGATT TTAATGCGAT TAACTCCATC
GGCCTGCCCA CCGGTCCCGG AGATGCTTCC GGCATAGCCA ATCTCAAAAT AGAAAAGCGT
GACGGGCAAA GCAGCAACGG GGCTGCGGAC GCCACCGGCC TGCCGGAGAC CTACGCGGGG
GCCATCACCA CCATTGACCC GGCGGATACG GACATATTCT GGAACAGTTC GCTCAGTCGC
TGGGAAGTAA GCTTTAACGT AACGGGTTTC AGCGGTTTTT TTGCCAAAAG CACCAGCGAT
CCCTTGCCCG TTACGCTGGC GTCGTTCGAG GGCGCTAAGG AAGGAAACGC GGTATTGCTG
AACTGGAAAA CCACCTCGGA AATCAACAGC GACTTCTTCG CCGTTGAGCG CAGCACCAAT
GGCAAGGCTT GGGAAACCAT CGGGAAAGTA CCCGCGATGA ACAACAGCCA GGTGACGCAA
TCCTACGCAT TCAGAGATTC ATCGCCCCGC AGCGGAGAGA ACATTTACAG GCTCAAAATC
ACCGACCGCG ACGCGAGCTT CACATACAGT CGAATGCGGA GCGTGACTTT CCAGCCATCC
GACGAAGTGG TGCTGTACCC CAATCCCGCC TCCGGACCGG TACAGGTGCG CGTCAGCCCA
CGCTACATAG GCAGCCAGGC CACGCTGATC GACGGCTCAG GCAAAGTGTT GAAAACGATC
AGCATTACCG CCGAAAAATT CCGCCTGGAC CTGAATGCCA GCGGCGCTTA CCTGCTCAGG
ATGCAGGATG GGCAGAGTGT GAAGGTGGTG AAGGCATCCG GGTTCCAGTA A
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| Protein sequence | MNKQLRFLFF LLCFPLSIAA QISGDVNGVV YVMPSAMGTG DGSSWANAAG SLATVLQEAH
TNTAIEQVWV AAGTYYPSST NNRDDFFRVR RSNLKLYGGF AGDETSLSQR DWAANKTILS
GNIGDAASSE DNSYHIMVVS IDETQTAPFS PVDNSTVIDG FEFSDGNANA GSVLNNLFPR
HSGSAMMITT WGEDVSCTPA IRNCVFKNNQ AFQTGAVYID AAAKQGATDT LRIADCHFEN
NLAEYQGGGL ALFNLADIGY DGTNAFYNVK VTNTEFVGQS ANNDSQGGPA GGIGGGVAAT
GRGYLRLDAC TFRNNTSTND GAAIGLRNGA KVAVTNSLLY NVSSNKPVIY AAGKSELIPD
LKVYNTTLYN PDGTVLKVQD NVITGLINSI LWTDGAADAI TVAGSAATGT AANSLIKTTD
VNNPASGFSA SAVISAAPGF VSVAASDFRP SAMSPVINQG NSSLNTFALA RDLSGGPRVV
GSAIDMGAYE YRNKYFVDAT ASGANNGSTW ADAYTDLQTA IDHAAFGDSL FVKKGVYSLT
ATISMKDSVK IYGSFAGTEE YLSQRVFGAD SSILLRPATA TSNFRIVTNH FSEANPMTDE
AVLDGFVLRG GHLIGNTNLD RGGGMSNRYA SPTLSNLIIT SNRTEAYGGG MYNGASTSVL
TNVVITGNVA SDRGGGIANL RSNPTLNNVT ISRNTGPNWG GGIYNENSSP MLNQVMISEN
NAIDRGGGIF GTTNCSPVLS NVVIKGNYLT GQNGAGQPMR FGGGMHNEVN CHPVLTNVLI
SGNSAYNFGG GISNIVNSKP VLTNVTISGN SAYAYGGGIY NDSSSPEIRN SIILGNSATY
YNGIYNVTNS VPVIAFSLIE ELTNTDNGNI SSKKIDGADI TASEVFANPD NSATYTTPSM
AGDYHLITCS PAVNAGDPAS TAAPTDITGY TRVGTYDLGA YEYQGPVGAA ALAAHGATSV
STQQGTVYYG ACPEVIARVS SNTTDGASGS TTAKLWIEST QPAQYVKRHY EITPATNGSG
QVTLYFTQEE FDDFNAINSI GLPTGPGDAS GIANLKIEKR DGQSSNGAAD ATGLPETYAG
AITTIDPADT DIFWNSSLSR WEVSFNVTGF SGFFAKSTSD PLPVTLASFE GAKEGNAVLL
NWKTTSEINS DFFAVERSTN GKAWETIGKV PAMNNSQVTQ SYAFRDSSPR SGENIYRLKI
TDRDASFTYS RMRSVTFQPS DEVVLYPNPA SGPVQVRVSP RYIGSQATLI DGSGKVLKTI
SITAEKFRLD LNASGAYLLR MQDGQSVKVV KASGFQ
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