Gene Dfer_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_2178 
Symbol 
ID8225750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2663717 
End bp2664781 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content56% 
IMG OID644930015 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_003086566 
Protein GI255035945 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAGC TATTTTCTCC TGTTACTATT AAAAGTGTCC AGTTCAAAAA CCGGATCGTT 
GTTTCTCCTA TGTGCCAGTA TTCGTCTATC GACGGCTTTG CTACCGACTG GCACCTGGTT
CATTTGGGGA GCCGTGCCGT AGGCGGCGCC GGGCTTATCA TCTCCGAAGC CACCGCCGTG
TCGCCCGAGG GGCGCATTTC GCCCGAAGAT CTCGGAATAT GGAAGGACGA GCATATTGAA
ATGCTTTCGC AAATTACCGC GTTTATCAGC GAGCAGGGGT GTGTGCCGGG TGTGCAGCTC
GCACATGCGG GCAGGAAGGC CAGCACGGCC GTACCGTGGA AAGGTCGGGC GGAAGTGCCC
GCGAGCGCGG GAGGCTGGCA AACGGTTTCG GCCTCCGATG TTCCGTTTTC GGATACCTAT
CCCAAGCCGG TTGCGCTAGA CGAAGCGGGT ATTGAAAAAG TCGTTTCCGA TTTTACCGAA
GCCGCCAAAC GTGCCTTGCA GGCCGGTTTC AAAGTGATCG AAATACATGC CGCGCACGGT
TACCTGCTGC ACCAGTTCCT GTCGCCGCTC AGCAACCACC GCACCGATGA ATATGGCGGC
AGCTTCGAGA ATCGCATTCG CCTGCTGCTA CGCGTGATCG AGGGTATTCA AACCGTATGG
CCCGCTGACC TGCCGCTGTT TACGCGCATT TCGGCAACCG ACTGGGCCGA AGGCGGCTGG
AACATCGACG AATCCGTGCA ACTGGCGGCC ATTCTCAAAG AAAAAGGCAT TGACTTAATC
GACGTGTCGT CGGGTGGCCT GGCTGCGCAT CAGCAGATTA CGGTCGGACC GGCTTATCAG
CTGCCGTTCG CCTCGCGCAT TAAACGTGAA ACCGGCATTC TGACCGGCAC CGTAGGCCTG
ATCACCAATT CCCTGCAAGC CGAAACGATC CTCGTCAATG GGGATGCAGA TATGATCATC
ATGGCACGGG AGATTTTGCG GAATCCGTAC TTTCCGCTGG AAGCCGCGCA CGATTTGAAG
GAAAACGTCG CGTGGCCGGT GCAATATGAA AGGGCCAAAT GGTAA
 
Protein sequence
MSKLFSPVTI KSVQFKNRIV VSPMCQYSSI DGFATDWHLV HLGSRAVGGA GLIISEATAV 
SPEGRISPED LGIWKDEHIE MLSQITAFIS EQGCVPGVQL AHAGRKASTA VPWKGRAEVP
ASAGGWQTVS ASDVPFSDTY PKPVALDEAG IEKVVSDFTE AAKRALQAGF KVIEIHAAHG
YLLHQFLSPL SNHRTDEYGG SFENRIRLLL RVIEGIQTVW PADLPLFTRI SATDWAEGGW
NIDESVQLAA ILKEKGIDLI DVSSGGLAAH QQITVGPAYQ LPFASRIKRE TGILTGTVGL
ITNSLQAETI LVNGDADMII MAREILRNPY FPLEAAHDLK ENVAWPVQYE RAKW