| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_2174 |
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| Symbol | |
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| ID | 8225746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 2657518 |
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| End bp | 2660676 |
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| Gene Length | 3159 bp |
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| Protein Length | 1052 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644930011 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_003086562 |
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| Protein GI | 255035941 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.486417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCAGA AATTTATAGA AAGGCCCGTC CTTTCGACAG TAATATCGAT CCTGATATTA
CTGCTCGGGA TCATATCGCT CACCACGCTG CCGATAACGA AGTTTCCCGA CATAGCCCCG
CCGACGGTAC AAGTAACCGC CGTATACCCG GGAGCGAACG CAGAAGTGGT TGCCCGCGCA
GTGGCAACGC CCATCGAAGA AGCCGTGAAC GGAGTTGAGA ACATGACCTA CATGACCTCG
TCCTCCAACA ACGACGGTAC CATGGCCCTA AATGTGTATT TCAAACAGGG CACCGACCCG
GATATCGCTG CCGTGAACGT TCAAAACCGC GTTTCCAAAG CGGTAAGCCA GATTCCCCAG
GAGGTGGTGC AAGCCGGTAT CTCCACGCAA AAACAGCAAA ACTCGATCAT CATGTTCGTA
GCGCTTTCGA GCGAAGACAG CACTTACGAC GAGACGTTCC TTTTGAACTA CATTAAGATC
AACCTCGTGC CTCAGCTGCA ACGTATACCG GGGGTCGGTC AGGCGCAGCC GTTCGGTACG
CGGGATTATT CGATGCGGAT CTGGCTCAAA CCCGACCGTC TGGCAGCATT GGGACTGTCG
CCGCAGGAAG TAACCGGCGC CATTCGTGAG CAAAGCCTTG AAGCAGCCCC GGGACGTCTC
GGCGAAGCGA GCAAAGAGGT TTTTGAATAT GTTTTGAAAT ACAAAGGAAA ACTAACGCAA
AACAAAGAGT ACGAGGACAT TATCATCAAA GCCAATAGCG ATGGTTCCGT GATTCGCCTG
AAAGATGTGG CGCGCGTCGA ATTCGGTTCT TACACCTACT CTTCCAATGG TAAGCTGAAC
GGCAACGCAT CGTCCGGTGT GGCGGTGTTC CAAACGGCCG GTACCAATGC GAACGACATC
CTGATCCAGG CAGAAAAGCT GATCGAAGAT TTTTCCAAAA CATTACCCAA AGGTCTGAAA
ACGACCATCA TGTACAACTC GAAGGACTTC CTCGACGAGT CGATCAACCA GGTACGGTCC
ACACTTTTGG AAGCATTCAT TCTCGTGTTT ATCGTAGTGT TCATCTTCTT GCAGGACTTC
CGCTCGACGC TCATCCCGGC CATTGCCGTG CCGGTGGCCA TTGTGGGAAC GTTCTTTTTC
ATGCAGCTCT TCGGGTTTAC GATCAACTTC CTCACGCTCT TTGCATTGGT GCTCGCGATC
GGGATCGTGG TGGATGACGC CATTGTGGTC GTGGAGGCGG TGCACTCGAA AATGGAGCGA
ACGAACCTGG CGGCCAAATC GGCTACCGTC GAGTCCATGA ACGAGATTTC GGGCGCGATC
ATTTCCATTA CCCTTGTAAT GGCCGCGGTG TTTGTGCCGG TCGGATTCAT GCAGGGCCCC
GCCGGGGTAT TTTATCGGCA GTTTGCATTT ACATTAGCCA TAGCCATTTT GATTTCCGCA
TTGAACGCGC TCACACTCAG TCCCGCGCTC TGTGCATTAT TCCTGAAAAA TCCGCATGCC
GAAGAAGGGC ATGGCGGTAA ACGCAAAGGT TTCGCGGCCC GTTTCTTTGC GGCATTCAAT
GCAGGGTTCG AGTCGATGAC CGGCCGGTAT GTGAAAAGCC TTCAATTCCT GATCCGTCGT
AAATGGGTGA CTATCATAGG ATTGCTGGTC ATTTCAGGCA CAACACTTTG GCTCACCAAA
ACCACGCCTA CGGGGTTCAT CCCGACCGAA GACCAGGGCT TCCTGCTTTA CGCCCTCAAC
ACGCCTCCGG GCAGCTCCCT CGACCGTACC TCGAAAGCGA TGGCGCAGGT GGATAGCATC
GTGAAAAAGT CGCCCATCGC CGACCAGCGC TACATTGTGG AAGGTATGAA CATCATTTCG
AACTCCAACG CATCGCCTTA CGGTGTGGGC TTCATCCGCA TGAAACCGAA GGAAGAGCGG
GGCGAAGTGC AGGATTTCAA TGAGATCGTA GGCATGATGT CGCAGCAGGT ACGCTCGGTG
AATGATGCCA ATGCATTCTT CTTCACCTTC CCTACCGTGG ATGGTTTCGG TAACGTCAGT
GGCTTCGAGT TTATGCTGCA AGACCGCGGA AACGGTTCAC TGGAAAAACT CAGCACCACT
ACCAACGCAT TCATCGGCGC GCTGATGCAG CGTCCGGAGA TCGCTTATGC ATTCACCACC
TTCGCAACGG GTAACCCGCA ATTCCAGCTG GAAATCGACA ATGCGAAAGC CAAACAGCTG
AATGTACCCG TGAACGAATT GCTGCAAACG CTGCAAATTT ATTACGGTTC GAGCTTTGTG
TCGGATTTCA ACCGGTTTGG TAAATATTAC CGCGTGATGG CCCAGGCCGA TCCGCTGTAC
CGCCAGAACC CGGCTTCGCT CGATGGTATT TATGTCAAAA ACACCGAGGG CGAAATGGTA
CCGGCCAACC AGCTGGTGAG CCTGAAACGC GTGTTCGGAC CTGAAACGGT GACCCGCAAC
AACCTGTACA ATGCCGTGAT GATCAACGGA ACGCCTAAGC CGGGTTACAG CACCGGTGAC
GCCATCCGCG CCGTGCAGGA AACCGCCGAA AAGGTGCTGC CAAACAACTA CAAAACCGAA
TGGACCGGTA TGACGCGTGA AGAAATTAAC TCCGGCTCGC AGATCATCCT GATTTTCGTG
CTCAGCCTGG TGTTCGTGTA CTTCCTGCTC GCCGCGCAAT ATGAAAGCTA CATCCTGCCG
CTGGCCGTGA TCCTCACCAT TCCGCTGGGG GTGTTCGGCG TGATGCTGTT CATCAACTGG
ATGGGTATTG AAAACAATAT ATATGTACAG GTCGGTTTGA TCATGCTCAT TGGCTTGCTC
GCGAAGAACG CGATCCTGAT CATCGAATAT GCCGTGCAGC GCCGTAAAGC GGGCATGAGC
ATCGTAGAGT CGGCATTGGA AGCCTCGCGA CTCCGCTTAC GTCCGATCCT GATGACCTCG
TTCGCATTCA TCGTTGGGCT GTTACCGCTG ATGCGCGCCA CCGGTGGCTC AGCGCTTGGA
AACCGTTCGA TCGGTACCGG GGCGGTCGGC GGGATGCTTA CAGGGGTGAT TTTCGGGGTA
TTCGCGATCC CCGTGCTGTA TGTGATCTTC CAGTATTTGC AGGAAAAAGT CGTCAAAAAA
CCGGTTGAAC CGGAACTCGC CGAAGCCGAG GTGCACTAG
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| Protein sequence | MFQKFIERPV LSTVISILIL LLGIISLTTL PITKFPDIAP PTVQVTAVYP GANAEVVARA
VATPIEEAVN GVENMTYMTS SSNNDGTMAL NVYFKQGTDP DIAAVNVQNR VSKAVSQIPQ
EVVQAGISTQ KQQNSIIMFV ALSSEDSTYD ETFLLNYIKI NLVPQLQRIP GVGQAQPFGT
RDYSMRIWLK PDRLAALGLS PQEVTGAIRE QSLEAAPGRL GEASKEVFEY VLKYKGKLTQ
NKEYEDIIIK ANSDGSVIRL KDVARVEFGS YTYSSNGKLN GNASSGVAVF QTAGTNANDI
LIQAEKLIED FSKTLPKGLK TTIMYNSKDF LDESINQVRS TLLEAFILVF IVVFIFLQDF
RSTLIPAIAV PVAIVGTFFF MQLFGFTINF LTLFALVLAI GIVVDDAIVV VEAVHSKMER
TNLAAKSATV ESMNEISGAI ISITLVMAAV FVPVGFMQGP AGVFYRQFAF TLAIAILISA
LNALTLSPAL CALFLKNPHA EEGHGGKRKG FAARFFAAFN AGFESMTGRY VKSLQFLIRR
KWVTIIGLLV ISGTTLWLTK TTPTGFIPTE DQGFLLYALN TPPGSSLDRT SKAMAQVDSI
VKKSPIADQR YIVEGMNIIS NSNASPYGVG FIRMKPKEER GEVQDFNEIV GMMSQQVRSV
NDANAFFFTF PTVDGFGNVS GFEFMLQDRG NGSLEKLSTT TNAFIGALMQ RPEIAYAFTT
FATGNPQFQL EIDNAKAKQL NVPVNELLQT LQIYYGSSFV SDFNRFGKYY RVMAQADPLY
RQNPASLDGI YVKNTEGEMV PANQLVSLKR VFGPETVTRN NLYNAVMING TPKPGYSTGD
AIRAVQETAE KVLPNNYKTE WTGMTREEIN SGSQIILIFV LSLVFVYFLL AAQYESYILP
LAVILTIPLG VFGVMLFINW MGIENNIYVQ VGLIMLIGLL AKNAILIIEY AVQRRKAGMS
IVESALEASR LRLRPILMTS FAFIVGLLPL MRATGGSALG NRSIGTGAVG GMLTGVIFGV
FAIPVLYVIF QYLQEKVVKK PVEPELAEAE VH
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