Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2030 |
Symbol | |
ID | 8225602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 2475917 |
End bp | 2477422 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644929867 |
Product | phytoene desaturase |
Protein accession | YP_003086418 |
Protein GI | 255035797 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACA CACTACATGA TCATCACGGA GGCAAAAAGG CGGTAGGCGT CATCGGGGCC GGCTTTGCGG GAATGGCCGC CAGCGCCATT CTGGCGTACC AAGGGCATCA GGTAACCGTT TTTGAGAAAA ACGACACGAT CGGCGGACGC GCACGCACCT TTTCGGATCA GGGATTTACA TTCGATATGG GGCCAAGCTG GTACTGGATG CCCGACGTGT ACGAGCGTTT TTTCGGGCAA TTCGGGCACA GCGTGTCAGA CTGGTACCAG CTCCGCCAGC TCGACCCGGG CTTTGCGGTG GTGTTTCCGG GTGGCGAGGT GATGGACATT CCCGCCGACT TCGAAGCGCT TTGCGCGCGG TTCGAAGAAA TTGAAACGGG CGCGGCGGAT AAACTCCGCC GGTTTATCGC CGACGGGGAA TTCAAATATG AAACGGGCAT GCACGACATG GTGTACAAGC CCGGACATTC CATCACCGAA TTCATGAGCC TGAGGCTCTT CGGCCAGGCG CTGCGTTTGC AGGTTTTCAG CTCGTTCAGC AAGCACGCGC GGCGGTTCTT TAAAGATCCC AGGTTACTGG CACTGATCGA ATTTCCGGTG CTTTTTTTGG GCGCAATGCC GAAGGACACG CCTGCGCTTT ACAGCCTGAT GAACTACTCG GGGCTCAAAC AGGGAACATT TTATCCCATG GGCGGATTTG GAAAAGTGGC CGATACGTTC CGCGACATTG CCAGGCAAGC CGGCGTGGAG TTCCGAACTG CCGAAACGGT TGAGAAACTG GAAACCTCCA ACGGCAAAAT CCACCATATT CACACCACCA GCGCATCGGT AGCAGCCGAC GCCATTATCG GCAGCGCGGA TTACCGGCAT ATTGAAGATG CGCTGCTGGC ACCGGCAGAC AGGCATTATA ATGAAACCTA CTGGCAAAGC CGGACATTCG CCCCCTCCTG CCTGCTTTTT TATCTCGGTG TAAACAAGCG CATTCCAAAA CTGCGGCATC ATAACCTCTT TTTCGACCAG GATTTCGGCC TGCATGCCGA AGAAATATAT AAGGACAAAA AATGGCCTAC GGCGCCGCTT TTCTATGTCT GCTGCCCGTC GGTCACAGAT CCATCGGTAG CGCCCGAAGG TTGCGAAAAC CTGTTCATCC TGATGCCCAT CGCCACCGGC CTGCCCGATC CAGAGCCCAT CCGCGAACAT TACTACCAGA TCCTGATGGA CCGCCTTGAA AAGTTTGCCG GCGAAACCAT CCGGGACCAT ATCGTATACC GAAAAAGCTA TTGCGTTTCG GATTTTAAGA ATGATTACAA CGCTTACCAG GGCAACGCCT ACGGCCTTGC CAATACCCTG CGCCAGACGG CCGTTTTCAA ACCCAAGCTG AGAAGCCCGA AAGTCAGTAA CCTGTTTTTC GCCGGACAGC TCACCGTTCC GGGCCCCGGC GTGCCCCCCG CAATCATCTC CGGCAGCATT GCCGCCCATG AAGTCCTCAA ATACCTAAAC AACTAG
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Protein sequence | MSHTLHDHHG GKKAVGVIGA GFAGMAASAI LAYQGHQVTV FEKNDTIGGR ARTFSDQGFT FDMGPSWYWM PDVYERFFGQ FGHSVSDWYQ LRQLDPGFAV VFPGGEVMDI PADFEALCAR FEEIETGAAD KLRRFIADGE FKYETGMHDM VYKPGHSITE FMSLRLFGQA LRLQVFSSFS KHARRFFKDP RLLALIEFPV LFLGAMPKDT PALYSLMNYS GLKQGTFYPM GGFGKVADTF RDIARQAGVE FRTAETVEKL ETSNGKIHHI HTTSASVAAD AIIGSADYRH IEDALLAPAD RHYNETYWQS RTFAPSCLLF YLGVNKRIPK LRHHNLFFDQ DFGLHAEEIY KDKKWPTAPL FYVCCPSVTD PSVAPEGCEN LFILMPIATG LPDPEPIREH YYQILMDRLE KFAGETIRDH IVYRKSYCVS DFKNDYNAYQ GNAYGLANTL RQTAVFKPKL RSPKVSNLFF AGQLTVPGPG VPPAIISGSI AAHEVLKYLN N
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