Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_2022 |
Symbol | |
ID | 8225594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 2464702 |
End bp | 2465379 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644929859 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003086410 |
Protein GI | 255035789 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.613149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAAA AAGCCCTGTT GATGAGCTCT CAAATGGAAT ATAACGCGAA ACAAATACAG ATCATAGAAG TGGCGGAGCG GCTGTTCTCA CAGAAAGGTT TCGCCGGTAC CTCGGTGCGG GATATCGCCC AGGAAGCGGA TGTGAATGTC TCGATGATAT CCTACTATTT CGGTTCGAAG GAGAAGCTGA TCGAAGCGCT TTTCCAGTTT CGCATGACCG AATCCAGCAA CCGCCTCGAA ACCCTGATGA TGGCCAGCGA GCTTTCCGCG CTGCAAAAAT TCAATGTCTT CATCGACAGT GTGATCGACC GGCTGATGGG CAATCAGTGC TTTCATAACA TTATGATGCG CGAGCAGCTG TCGTCGGAGC GCACGCCGGT TATTTCGGAG TACATCCGCG GACTGAAAAT GCGGAATGTG GAACTGATCG CGCGGATGAT CCGCGAAGGA CAGGACGCCG GCGATTTCCG GAAGGATATC AATGTAAGCC TGGTCACCAC CACGCTTTAC GGCACCGTTA ATTACGCCAT TGCCACCCAG GATTTTTACA GGATCATCAA TGGCCTCGAA CAGCTTTCCG ACGAAGCGTT TCACCAGCAT TTGCGGACTG AGCTGAGCCA ACACCTTAAG AACTTATTCA AATCAACAAT AACCAATGAA CACCACGTCC AGAATTAG
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Protein sequence | MTKKALLMSS QMEYNAKQIQ IIEVAERLFS QKGFAGTSVR DIAQEADVNV SMISYYFGSK EKLIEALFQF RMTESSNRLE TLMMASELSA LQKFNVFIDS VIDRLMGNQC FHNIMMREQL SSERTPVISE YIRGLKMRNV ELIARMIREG QDAGDFRKDI NVSLVTTTLY GTVNYAIATQ DFYRIINGLE QLSDEAFHQH LRTELSQHLK NLFKSTITNE HHVQN
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