Gene Dfer_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1993 
Symbol 
ID8225565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2433354 
End bp2433767 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content46% 
IMG OID644929830 
Productthioesterase superfamily protein 
Protein accessionYP_003086381 
Protein GI255035760 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCTT CTGAAATAGA TATTGATATC CGATTCAGCG AAACCGATGC CATGGGAGTG 
GTGTGGCACG GCAACTATCT GAAATTTTTC GAGGACGGAA GAGAAGCTTT TGGAAAGAAG
TACGGGTTGG AATACCTCGA TATTCACGCC AAAGGTTTCG TGACGCCCAT CGTGAAGTCG
GAGATCGACC ATAAGGCGCC TGTTTATTAC GGACAGGTTA TTAAAGTGAT TACAAAATAC
ATTCCGACCA AATCGGCCAA GATCCAGTTT GAATATCAGG TGATTAACGT TACCACCGGC
CAGCTTTGCG CTACGGGCAA AACAATGCAG GTATTCCTCG ACCGCGATTC GCGCGAGCTG
GAACTGATCT CGCCGGAATT TTATAAGGAA TGGAAAGCGC AGTACGACCT ATGA
 
Protein sequence
MISSEIDIDI RFSETDAMGV VWHGNYLKFF EDGREAFGKK YGLEYLDIHA KGFVTPIVKS 
EIDHKAPVYY GQVIKVITKY IPTKSAKIQF EYQVINVTTG QLCATGKTMQ VFLDRDSREL
ELISPEFYKE WKAQYDL