| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1966 |
|---|
| Symbol | |
|---|
| ID | 8225538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 2400873 |
|---|
| End bp | 2403380 |
|---|
| Gene Length | 2508 bp |
|---|
| Protein Length | 835 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644929803 |
|---|
| Product | Peptidase M1 membrane alanine aminopeptidase |
|---|
| Protein accession | YP_003086354 |
|---|
| Protein GI | 255035733 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0308] Aminopeptidase N |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCAA TACGCTCCCT TATTTTGGCA TCAGCCGCAC TCCTGGCTGT GCTCGCATGC
TCCCGACCGG AAGGTTCGGC TCCCGAAAAA GGCGTCTCGT TCGCGCTCAA CCAGTACCGT
AAGCAGCATA TCGACAGCAT TCGCTACGCC ATCGAGCTGG ATATTCCTGC CGGGAAGGCG
GGGAAGATTG TGGGGAAGGA GACGATATCG TTTCATCTCG ATGCGCTCGA TTCGGCGCTT
GTGCTGGATT TTAATGCGGA TGCAGGGCAT TTGCTGGATG TGCGTGTGGG AGATGAGCAG
GTAGGGCACC AGTTTGTGAA TGAGCATATT GTGATTGATC CAAAGCATTT AAGAAAAGGC
AGGAACGAGG TGGTGATCGA TTTTGTGGCG GGCGATCAGT CGCTGAACAG GAGCGAGGAT
TATCTGTACA CCCTGTTCGT TCCCGACCGC GCTTCGACCT GCTTTCCGCT TTTTGACCAG
CCGAACCTTA AAGCGTCCTA CCAGCTCACG CTGAAAATGC CGGTGGAGTG GGAGGCGGTT
TCAAATGGAA AACTGAATGC ACAGACAACC TCAAACGGTA AGCGCATTTA CGCTTTTGAG
GCCACGAAGC CGGTCAGCTC GTATCTTTTT GCATTTGCCG CCGGGAAGTT TTTCAAGGAA
ACCAGGACGC AGGATGGCCG CGAAATGACC ATGTACTACC GCGAAACCGA CACGACGAAG
GTGAACCGCA ACCGCGACGA GGTTTTCAGG CTGCATGCAC AGTCGCTCAC CTGGCTCGAA
GACTATACAA GCATTGAATA TCCTTTCGGG AAGTTTGATT TCGTGCTGCT GCCGTCATTC
CAATATGGTG GAATGGAGCA TCCAGGGGCC GTTTTTTACA ATGAATCTGC GCTGTTCCTG
GATGAAAATG CATCGGTTAA CCGCAAAATG GCCCGCGCGA GTGTGATCGC ACACGAGTCG
GCGCACATGT GGTTCGGCGA CCTGGTGACG ATGGACTGGT TTAACGACGT TTGGCTGAAA
GAGGTTTTTG CCAACTTCAT GGCCGCCAAG ATCGTGCATC CCAGTTTTCC GGAAATCAAC
CACGATTTGC GCTTCCTGCT CGCGCATTAT CCGAACGCCT ACGACGTGGA CCGCACTGCC
GGAACGAACC CGATTTTACA GCAATTAGGC AATCTTAAAA ACGCCGGAAC GCTCTACGGG
GCGATTATTT ATATGAAAGC GCCGATCGTG ATGCGGCAGC TGGAACGTAA AATCGGTGAG
AAGATGATGC AGGAAAGCCT GCGCGAATAC CTGAAAACCT ATTCGTTCGG TAATGCACGC
TGGGACGACC TGATCGGGAT CATCGACAAG CGTACGCCGC AGGATATTGC CGCGTGGAGC
AATGTGTGGG TGAAAACGCC CGGAATGCCC CAATATCAAG TCGAAAACGG CCAGCTGGCC
CAAATGCAGG ATTCGGTTTC AGGCCGGGTT TGGGAGCAGC CGCTCGTAAT GAAAACCCTG
CCCGAAGCAG GTGAAGGTCT GGCATTTCCC AATCAGGATG GAACGGGTTA TGGGTATTTC
AAAATGGATT CCGCCAGCAA AGCATGGTTT TTCAAACATT ACGATCCTGC GGCTCCGGCT
TTGCGCGACC CGGTGTTCCG CGGCGCCATG CTGGTGAATG GGTGGGAAGG AATGCTGCGC
GGCGATGGCC CGGCTCCGGC CCAGTTCGTG ATCCACACGA TGAATGCATT GCCCAAAGAG
CAAAACCCGC TACTGGTCGA TTATCTGCTG GGTAATTTGC AAACAACCTG GTGGGTGTTT
TTGAATGCGG ATCAGAGAGC TGAATATCAG GTCCGAATGG AAAATAAAAT ATGGCAGTTG
TTAAACTCAA CTACCGATAA GGGTATTCAA ACTTCATATT TCAGGGCATT CAAGGCGCTG
GCGCTTACCG ATGACGGCTG GCAAAAAATG CACGGCATCT GGACCGGCAA GCTGGAAGTG
AAGGGCCTGG TTCTGTCCGA AGACGATAAA ATTTCACTGG CCTACGAACT GGCCCTGAAA
GGCAAGGGCG ATCCGAAGCT GATTTTGCAG ACGCAGCTGA ATGCCACGAA AAACCCCGAT
CGTAAAGCCA GAATGCAGTT TGTCATTCCC GCGCTGAGCA CCAGTGAAGC AGAGCGCGAT
GCCTTTTTTG AAACCCTGAA AAAGGAAGAA AACCGCGAAA AGGAAGCATG GGTGCTCGAT
GCATTGGCCT ACCTGCACCA TCCGCTGCGG ACGCGCAGTG CATTGAAATA CCTCCGGCCT
TCGCTCGACT TGTTGCAGGA AATCCAGTTG ACAGGCGATA TTTTCTTCCC GACCCGCTGG
CTGCACAGCA CCTTCGCGGG ACATTCGTCA CCGGAAGCTG CTGCCATCGT GCAAGCGTTT
TTGAAAGCGC ACCCGGGCTA TCCTTATTTC CTGAAAAACA AAATTTTACA GGCAACCGAT
ATGCTCGATC GCTCGGTAAA GCTTACCGCA GCCAATGGCC GCAGCTAG
|
|---|
| Protein sequence | MNSIRSLILA SAALLAVLAC SRPEGSAPEK GVSFALNQYR KQHIDSIRYA IELDIPAGKA
GKIVGKETIS FHLDALDSAL VLDFNADAGH LLDVRVGDEQ VGHQFVNEHI VIDPKHLRKG
RNEVVIDFVA GDQSLNRSED YLYTLFVPDR ASTCFPLFDQ PNLKASYQLT LKMPVEWEAV
SNGKLNAQTT SNGKRIYAFE ATKPVSSYLF AFAAGKFFKE TRTQDGREMT MYYRETDTTK
VNRNRDEVFR LHAQSLTWLE DYTSIEYPFG KFDFVLLPSF QYGGMEHPGA VFYNESALFL
DENASVNRKM ARASVIAHES AHMWFGDLVT MDWFNDVWLK EVFANFMAAK IVHPSFPEIN
HDLRFLLAHY PNAYDVDRTA GTNPILQQLG NLKNAGTLYG AIIYMKAPIV MRQLERKIGE
KMMQESLREY LKTYSFGNAR WDDLIGIIDK RTPQDIAAWS NVWVKTPGMP QYQVENGQLA
QMQDSVSGRV WEQPLVMKTL PEAGEGLAFP NQDGTGYGYF KMDSASKAWF FKHYDPAAPA
LRDPVFRGAM LVNGWEGMLR GDGPAPAQFV IHTMNALPKE QNPLLVDYLL GNLQTTWWVF
LNADQRAEYQ VRMENKIWQL LNSTTDKGIQ TSYFRAFKAL ALTDDGWQKM HGIWTGKLEV
KGLVLSEDDK ISLAYELALK GKGDPKLILQ TQLNATKNPD RKARMQFVIP ALSTSEAERD
AFFETLKKEE NREKEAWVLD ALAYLHHPLR TRSALKYLRP SLDLLQEIQL TGDIFFPTRW
LHSTFAGHSS PEAAAIVQAF LKAHPGYPYF LKNKILQATD MLDRSVKLTA ANGRS
|
|---|
| |