| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1853 |
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| Symbol | |
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| ID | 8225424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2285403 |
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| End bp | 2287079 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644929703 |
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| Product | lipoprotein |
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| Protein accession | YP_003086255 |
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| Protein GI | 255035634 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02167] bacterial surface protein 26-residue repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0367597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATT TGTATTGCCT CATAATTGCT TTTCTCATCT GTCCCGAAAT CTTCGCTCAG
GAAGCGTTCA TAACCCGGTG GAACTTGTCA AATCCCGGAC TCTGGGACAC ACAGATCAGC
TTCTTTGCGA ATACCAGTGG ACCGGTGACT TATTACTGGA AGGAGATATC GCCTGGCACA
GCATCAGGTT CGGGTATATT CAACAGCAGC GGTAGTCTGG CAACAATTCG TAACCTGCCT
GCCGGTTCTA CCATAGACCT GAGTATCCAG CCCGAAAATT TTGATAGATT TCGCATGTCC
GACGGCCCTG ACAAAGAGCG TTTGATTGAT GTCAGACAAT GGGGAACAAC GGACTGGACA
TCGATGCAAA GCGCATTCGA GGGCTGTGTG AACCTTCAAA TCAGTGCTGC CGACATCCCC
GATTTGAGCC GGGTTACAAC CATGCAGTCC ATGTTTGCTT TTTGTAAAGT TCTGAATGGT
CCTGAAAATA TCGGTTTATG GCAAACTGGT AATGTCACAA ACATGATGTC GGTTTTTGAC
AATGCTCTGG CATTCAACCA GCCCATTGGC AGCTGGAATA CTTCGATGAT CACCACTATG
GACTGGATGT TTTCCTACGC GCTGTCTTTC AACCAGCCAT TGGGCGATTG GGATACGGGT
AATGTGACAG GCATGACGGC CATGTTTCAG GCAGCCAGAG CGTTTGACCA GCCGATTGGT
GACTGGAATG TGGGCGCTGT GACCAGCATG GGTAACATGT TTTTTGATGC CACCCAATTC
AACCAGCCAA TCGGACGATG GAATACCGCC AAGGTCACCA ATATGGACAG AATGTTTAGC
AGGGCTGTCA GCTTCAACCA ACCGTTAAAC AATTGGGACG TCAGTAAGGT CACCAGCATG
AGCTCCATGT TCGGAACAGC TTCTTCATTT AATCAATCAC TCGGTTCCTG GACTTTTCAC
CCGGCCGTTA ACCTGGCCAA TATGCTCAAT AGCTGCGGAA TGGATACAAG GAATTACGAT
TCGACCTTGA ACGGATGGAA CCAAAACCCG CTTACTCCAA ATGGTCGCAC CCTGCATGCG
GCGGGCCTTC GGTACAGCAG CAACGCCTTG GTGTCACGGA ACAATCTGAT CAATAACAAA
GGATGGACTA TTTTACGGGA TAGTCAGGCG CCACTGCCGG TCCGGCTTAT CAGCTTTACG
GGAATGTATC ATGAAAAGGC TGTTACATTG AACTGGACAA CATCCGAAGA AGAAAACAAT
GAGGGATTCG AAATCCAAAA AAGCGCAGAT GCGGTTTCTT TTGAAAAGAT TGGATTTGTC
CGGGGCAGTT CAGACACTAA AACGCTGAGC ACATATCAGT TTTTTGACCT GAGTCCATTT
TCAACAACCT ATTATCGACT AAAACAACAT GACCACGACG GAACTTTCGC ATATTCCCGG
ATCATCTCCG TCAAGAGTAA GACGGCACCC GTAAAAATCT ATCCGAACCC CGCCCGGGAT
GTGGTGTTTT TTGAAAGCGA GCGCACACCT CAAAAAGTGG TCATCGTGAA TCTGCTTGGA
CAAAAAGTAT GGGAAGAAGA TGACGTTGCC GAATCAATTG ACATAAGCAG CATTAGCGAT
GGGCTTTACA TTGTCAAAAT AGGAGAGCAG GTTACACCGC TTGTGATTCG CAGGTAA
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| Protein sequence | MKHLYCLIIA FLICPEIFAQ EAFITRWNLS NPGLWDTQIS FFANTSGPVT YYWKEISPGT
ASGSGIFNSS GSLATIRNLP AGSTIDLSIQ PENFDRFRMS DGPDKERLID VRQWGTTDWT
SMQSAFEGCV NLQISAADIP DLSRVTTMQS MFAFCKVLNG PENIGLWQTG NVTNMMSVFD
NALAFNQPIG SWNTSMITTM DWMFSYALSF NQPLGDWDTG NVTGMTAMFQ AARAFDQPIG
DWNVGAVTSM GNMFFDATQF NQPIGRWNTA KVTNMDRMFS RAVSFNQPLN NWDVSKVTSM
SSMFGTASSF NQSLGSWTFH PAVNLANMLN SCGMDTRNYD STLNGWNQNP LTPNGRTLHA
AGLRYSSNAL VSRNNLINNK GWTILRDSQA PLPVRLISFT GMYHEKAVTL NWTTSEEENN
EGFEIQKSAD AVSFEKIGFV RGSSDTKTLS TYQFFDLSPF STTYYRLKQH DHDGTFAYSR
IISVKSKTAP VKIYPNPARD VVFFESERTP QKVVIVNLLG QKVWEEDDVA ESIDISSISD
GLYIVKIGEQ VTPLVIRR
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