| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1833 |
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| Symbol | |
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| ID | 8225404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2255562 |
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| End bp | 2256353 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644929683 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003086235 |
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| Protein GI | 255035614 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.50771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAGGC TAGAAAATAA AGTAATCGTT ATCACGGGCG CTGCAATGGG GCTGGGTTTT
GCCACCGCTC TCGAAGCTGC CCGGAACGGC GCAGCATTGT CCATTATAGA CTATAACGCA
GAATCACTGG AAAAGGCGAA AGCCGAGATC CAATCCAGGT ACCCGGATAT TAACGTGCTT
GCGTCCGTCG CTGACGTTTC AGACGAAACT GCGGTCAAGA AGTACGTGGA CGATACAGTT
GCCGAGTTCG GCAGGATAGA CGGCTTTTAC AACAACGCCG GCATTGAAGG CAGACAGGCG
CCCATGGTCG AATATGATCT GGATGTCTTC AAAAAAGTGG TCGATATTAA TTTGATGGGT
GTTTACTATG GGTTGAAATA CATTATTCCG GTTATGCAAA AACAGGAATA TGGCCGGATT
GTCAACGTCG CTTCTGTGGG CGGGATTCGT GGTGTGATGA ATCAGACGCC ATATGTGGCT
ACCAAACACG CTGTTTCGGG GATAACAAAA AACGCCGCAT TGGAATACGG CCGTTACGGA
ATCCTGACCA ACGCCATTGC CCCCGGTGCG ATTCTCACGC CAATGGTGGC AGAGGCTTTC
AGACAGGTGA ATCCGGCAGA TCCCAAACAG GCGGAAGATC ATTACGCACA ATCCAACCCG
ACAAAGCGTC TCGGCTTGCC CGAGGAAGTC GGCAAACTGG TGGTGTTTTT GCTGAGTGAA
GATTGCAGCT ATGTCAGCGG ACAAGTCATC GCGATCGACG GCGGACAATC GAATTCGTAC
GGAAATGTTT AA
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| Protein sequence | MKRLENKVIV ITGAAMGLGF ATALEAARNG AALSIIDYNA ESLEKAKAEI QSRYPDINVL
ASVADVSDET AVKKYVDDTV AEFGRIDGFY NNAGIEGRQA PMVEYDLDVF KKVVDINLMG
VYYGLKYIIP VMQKQEYGRI VNVASVGGIR GVMNQTPYVA TKHAVSGITK NAALEYGRYG
ILTNAIAPGA ILTPMVAEAF RQVNPADPKQ AEDHYAQSNP TKRLGLPEEV GKLVVFLLSE
DCSYVSGQVI AIDGGQSNSY GNV
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