| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1758 |
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| Symbol | |
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| ID | 8225329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 2158308 |
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| End bp | 2161109 |
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| Gene Length | 2802 bp |
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| Protein Length | 933 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644929612 |
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| Product | lipoprotein |
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| Protein accession | YP_003086164 |
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| Protein GI | 255035543 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02167] bacterial surface protein 26-residue repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.25404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TTTATTTCCT TTTCAGCCTG CTTGTCATGG CAGTGTTGAA TGCCAGCGCG
CAATTTATTA CCGTTTGGAA AACAGATAAT CCAGGCGTTT TCAACAACTC TTCCATTACG
ATTCCCGCTA CCGGCAACCA ATATAGCATC GCCTGGGAGG AAGTGGGCAA CCCGGCCAAC
AACGGCACGG CCACCGGATC AGGCACGCAA GTACTCTCAT TTCCGTCACC GGGTACATAC
CAGGTGAGCA TTTCGCCGGG AAGCGGCACA TTCAGCAGGA TCGCCTTTGC CAATAGCGGC
GACAGAAACA AGCTGCTGGA AATTAAGCAA TGGGGCGATA TCCGCTGGAC GAGTATGGAA
AATGCTTTCC AGGGATGCAC CAACCTTACC ATATCGGCCA CCGATGCGCC CGATTTGCAA
GATGTGGCGA GCCTGGCAGG GATGTTCGAA AGCTGCGCGG CGCTCGCCAC CGTACCGGAG
ATCGACCAGT GGGATGTAAG CGGCATTACG AACATGGCCC GCCTGTTTTA CTTCGCCTCC
ACCTTCAACG CGCCGCTCGG TAGCTGGAAT ATGGGGAGTG TGACGAACAT GCATCAGATG
TTTCACAGCG CCAGTGCATT CAACCAGCCC ATTGGTAGCT GGGATGTGTC GAAGGTCACC
AACATGAATT CGATGTTTTA CCAGGCCCGG GCATTCGATG AAAGCATTGA AAACTGGAAT
GTTTCGAACG TGACGAATAT GGGTGCCATG TTTACGCTGG CCCCCGCTTT TAACAAGCCG
CTGGAAAAAT GGAACGTGGG CCAGGTGACC GATATGTCCA ATATGTTTTA CGGCGCCACT
TTGTTCAATC AGTCGCTGGA CCGGTGGGAT GTATCGAAGG TGCGGAATAT GACCGCCATG
TTCGTGAACG CAACTGCATT TAACCAACCC CTCGGCCGCT GGAACCTGAA CGCCGTCACC
ACGATGGTGC AAATGCTCCT GGGCTCGGGT ATGCAATGCG CCAGCATGAC CCTTACCTTG
CAGGGCTGGG CAGGCAATGC GGCTACACCG GATAACATCA CCTTCGGCGC GAATGGCCGT
AACTACGGCA GCCAGGCCGC TGCGGCATTG GCCACCTTGC GCGACACCAA AGGCTGGACG
ATCGCCATCG GCAGCGAGGT CACCTGTGCG CTGCCGCCCC GGCCTTATGT TGCGGTATGG
AAAACCGATA ATCCCGGCCG GACTGCCGAT AATCAGATCA TGATCGCGGC CACCGGCACC
GGTTACAGTG TGGCCTGGGA AGAAGTGGGT AATGCGGCTA ACTTCGGGAC TACGACGGGA
AGCGACTTGT TTACCCTCAC ACTGCCGCAT GCAGGAACCT ATCAGCTAAG CATTACGCCT
GGCAACGGCA CTTTCACCGC AATTAGAATG TCGGCGAGGG ACCCTCAGAA GCTGTTGGAA
GTCAAGCAAT GGGGAGATAT CCGGTGGTCG GACATGGAGC AGGCTTATTA CCGCTGCGTG
AATATGACAA TTACCGCTGG CGACCTTCCC GATCTGCGCG ATGTCAGGTC TATGCGGGCG
ATGTTTTCCG ACTGTCGGTT CACGACGGTG GCGGGTTTGG ACAAGTGGGA CGTAGGCAAC
GTGACCGACA TGAGCGCGCT CTTTATGAAT TCGCCCGCGT TTAATCAGTC TATCGCAGAC
TGGGATACTA AAAACGTCAC AGACATGAAC AACATGTTCA GCGGCGCAAC GAGTTTTAAC
CAGCCGATAG GCCGCTGGAA TGTGAGCAAG GTCCGCAACA TGACCAGGTT ATTCTTGAGT
GCGCATGCAT TCAATCAGCC GATAGGGGAT TGGGACGTTT CCCAGGTCGG AGCCATGGAG
GCAATGTTCC GGAACGCCTT TGCTTTTGAC CAACCGATCG GCGACTGGAA TGTATCCTCG
GTAACCGATA TGTCCTATAT GCTGCTGGGG GCCAGAAGTT TTAACCAGCC ACTGGAAAAC
TGGGACGTCC GCCAGGTCCG TAATTTTTCG CACATGATGT TCAGCGCAGA TGCTTTCAGC
CAGGAACTGG GTAAATGGAA CTTGTCGAGT GCGATCAACC TGACCGGGAT GCTGTCGCAT
TCGGGGATGG ATTGTGAGCA TGTGAGCCGC ACTTTAATGG CCTGGGCGGC GAACACCGAA
ACACCGGACG GTCTTACACT AGATGCGCAG GATGTTGCTT ACGCCAGCGC CGCCCGCACA
TCGATCGATT ACCTGCGCGA CACGAAAGGC TGGACGATCA CCCTGGGCGC GGAAGTGCCA
TGCGCCGCGC TGGACGTTTC GCTCGTTAGT TTCAATGTGA GCAAAGCCGG CGGGCAGGTG
AAAGTGAACT GGATCACGGC ATCCGAAACG GATAATGATT ATTTCGAAAT CGAGCGTTCT
GCCGATGCGC GCACGTGGAC GTCCATTGCA CGCATAGACG GCGCAGGTAC CACCACTACC
ACGCGCATTT ACAGCCACAC CGACGTCGCC CCGCTCTCTC CAAAGGCGTA TTACCGGTTA
AAAACAGTCG ACCTGGCGGG GAAGACGGAA TACTCAGCGA TCAGGGCCGC GGTTTTCGCC
GAGCGCGAAG AAAGGTTCAT TTATCCCAAT CCTGCCACTA CGTCGGCGAC CTTTTCAGGC
AAGCCGGGCA GTGTGGTGCA GATTTACAAT GCAACAGGCC GGAAGGTGCT TCAAATCACC
CTGATTTCAG AAAAAACGAC TATTCCGTTA AGCGGCCTCC CGGGCGGGGT TTATTTAATC
CGGTCGGATG AAGGATGGCA GGGGAAGTTC GTTAAAAAGT AA
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| Protein sequence | MKKIYFLFSL LVMAVLNASA QFITVWKTDN PGVFNNSSIT IPATGNQYSI AWEEVGNPAN
NGTATGSGTQ VLSFPSPGTY QVSISPGSGT FSRIAFANSG DRNKLLEIKQ WGDIRWTSME
NAFQGCTNLT ISATDAPDLQ DVASLAGMFE SCAALATVPE IDQWDVSGIT NMARLFYFAS
TFNAPLGSWN MGSVTNMHQM FHSASAFNQP IGSWDVSKVT NMNSMFYQAR AFDESIENWN
VSNVTNMGAM FTLAPAFNKP LEKWNVGQVT DMSNMFYGAT LFNQSLDRWD VSKVRNMTAM
FVNATAFNQP LGRWNLNAVT TMVQMLLGSG MQCASMTLTL QGWAGNAATP DNITFGANGR
NYGSQAAAAL ATLRDTKGWT IAIGSEVTCA LPPRPYVAVW KTDNPGRTAD NQIMIAATGT
GYSVAWEEVG NAANFGTTTG SDLFTLTLPH AGTYQLSITP GNGTFTAIRM SARDPQKLLE
VKQWGDIRWS DMEQAYYRCV NMTITAGDLP DLRDVRSMRA MFSDCRFTTV AGLDKWDVGN
VTDMSALFMN SPAFNQSIAD WDTKNVTDMN NMFSGATSFN QPIGRWNVSK VRNMTRLFLS
AHAFNQPIGD WDVSQVGAME AMFRNAFAFD QPIGDWNVSS VTDMSYMLLG ARSFNQPLEN
WDVRQVRNFS HMMFSADAFS QELGKWNLSS AINLTGMLSH SGMDCEHVSR TLMAWAANTE
TPDGLTLDAQ DVAYASAART SIDYLRDTKG WTITLGAEVP CAALDVSLVS FNVSKAGGQV
KVNWITASET DNDYFEIERS ADARTWTSIA RIDGAGTTTT TRIYSHTDVA PLSPKAYYRL
KTVDLAGKTE YSAIRAAVFA EREERFIYPN PATTSATFSG KPGSVVQIYN ATGRKVLQIT
LISEKTTIPL SGLPGGVYLI RSDEGWQGKF VKK
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