| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1733 |
|---|
| Symbol | |
|---|
| ID | 8225304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 2117007 |
|---|
| End bp | 2117975 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644929587 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003086139 |
|---|
| Protein GI | 255035518 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTTC AAATCGTATT CCTCGTTCCC GAAGGTCTGA TCAATTGGAG CAGCATTACC
GCTGTGAGTG AAATATTGCA ATGGGCCGAT GAACACTGGC AAAGTCACGG CCACAAGCTG
AGGCTGAATA TGGTGCTGGC AGGGCAGGGA CCGCAGATAA GCCCGTCCGA CATGCATTTC
CCGGTACTAA AATCGACTTC TATCGCCAGC GTGTCGCAGC CGGACCTGAT CATCATCCCC
TCCGTATCCC AGCAGTACAA AACCATGCTG GGCAGCTCGC ACGCGATGGT GGAATGGATC
AGGACGCAGC ACCAGCTTGG AGCCCAGGTC GCTAGCATTT GCACGGGCGC GTTTCTGCTC
GCGGCAACCG GGCTGGTCGA CGGGAAGCGG TGTGCGACCC ACTGGGATGC GGCCTACGAC
CTGCGGACTA TGTTTCCGAA AGTGAAGGTG TGTATAGACG TGCTCACCGA AGCCCCGGGC
ATTTACACCA ACGGCGGCGG CTATTCATTT CTCAACCTGG CCTTGATGCT GGTGGAAAAG
TACTTCGACC GGTCCACGGC AGTCCTGTGC GCGAAGATGT TCCAGATCGA CATCGGCCGG
AGCACCCAAT CGCCATTCGC CGTCTTTGCA GGTCAGAAAC GCCACGGTGA CCCGGTCATT
ATCAAGGCGC AGGAGTACAT CGAAGAGCAC ATCAGCGAAA AGATATCACT GGAAATGCTG
GCCTCGGACC TGGCTACAAG CCGGCGGAAC TTCGACCGCC GGTTCATCCG CGCCACCGGC
AACACGCCCA TGCAATACAT CCAGCGCGCC AGAATGGAAC TGGCCAAAAA AGCGCTCGAA
GAAACCAACC AAACCGTTTG GGAAATCATG CTCGGTTGCG GCTACAACGA CGAAAAGGCA
TTCCGGGAGG TTTTTCGAAA GCTGGTTGGA CTCCTGCCGC TGGATTACAA GGCCAGATAT
CGCCTCTAA
|
|---|
| Protein sequence | MQVQIVFLVP EGLINWSSIT AVSEILQWAD EHWQSHGHKL RLNMVLAGQG PQISPSDMHF
PVLKSTSIAS VSQPDLIIIP SVSQQYKTML GSSHAMVEWI RTQHQLGAQV ASICTGAFLL
AATGLVDGKR CATHWDAAYD LRTMFPKVKV CIDVLTEAPG IYTNGGGYSF LNLALMLVEK
YFDRSTAVLC AKMFQIDIGR STQSPFAVFA GQKRHGDPVI IKAQEYIEEH ISEKISLEML
ASDLATSRRN FDRRFIRATG NTPMQYIQRA RMELAKKALE ETNQTVWEIM LGCGYNDEKA
FREVFRKLVG LLPLDYKARY RL
|
|---|
| |