Gene Dfer_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1600 
Symbol 
ID8225171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1928366 
End bp1929283 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content63% 
IMG OID644929456 
ProductPfkB domain protein 
Protein accessionYP_003086008 
Protein GI255035387 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.443076 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCAA AACTGACGGT TTTCGGAGAA GTACTTTGGG ACGTGCTGCC CGACGCGCGC 
CTGGCCGGCG GGGCCACCAT GAACGTCGCC GCACATTTGC AGCGCTACGG CATGGACGTC
GCGTTCATCA GCCGCGTGGG CCACGACGAG CTCGGCGCCG GGCTGCTCGC ATTCATGGCG
CAGCAGGGCC TGGACACGCA ATGGGTGCAA ACCGGCGAAA CGCACCTGAC CGGTATTGCC
AAAGCCAACG TGTCCGATAG CAATGAGGTG ACCTACAAAA TCCTGCATCC CGTGGCCTGG
GACTATATTC AGTTCGATGC CGCTGCCGCC GGGAAGGTGG CCATCAGCGA CTTTCTCGTG
TACGGCACCC TCGCCGCCCG CGACCGCACC TCGCGCGACA CGCTGCTGCG CTACCTGGCG
CACACTGGCG CCGGCAATGC GCCCGTAAGG GTATTCGACG TAAACCTGCG CCCTCCGCAC
TACACACCCG AGCATGTGCT CGAACTGCTC GGCTTCGCAC AAATCGTTAA AATGAACGAG
CACGAGCTTC GTGAAGTGAC GGGCTGGCTT ACGACATTTG AAAACGAAAA ACAGGCGATG
GCGTTTATCG TCGACCGTTT CAGGCTCCAA ATGCTCGTAC TCACCTGCGG GGCCGAGGGC
GCGATGGTGC TCACGAGCCA TGGCGATTAC CACCGGCATG GCGGCTTTGC CGTGGAAGTG
GCCGATACCA TCGGCAGCGG GGACGCGTTC CTGGGCGCAT TCCTGTACCA GATCGCCACC
GGCCATGCCC TACCCGATTC CCTGGAATTT GCCTGTGCCG CCGGTGCGTT CGTGGCCGGC
AAGCCGGGCG CACTGCCGCC GTTCGGAGAG CAGGACGTCC GGAAATTCGT ACACGCGCAG
CAAGCGGCTG TTCACTGA
 
Protein sequence
MTPKLTVFGE VLWDVLPDAR LAGGATMNVA AHLQRYGMDV AFISRVGHDE LGAGLLAFMA 
QQGLDTQWVQ TGETHLTGIA KANVSDSNEV TYKILHPVAW DYIQFDAAAA GKVAISDFLV
YGTLAARDRT SRDTLLRYLA HTGAGNAPVR VFDVNLRPPH YTPEHVLELL GFAQIVKMNE
HELREVTGWL TTFENEKQAM AFIVDRFRLQ MLVLTCGAEG AMVLTSHGDY HRHGGFAVEV
ADTIGSGDAF LGAFLYQIAT GHALPDSLEF ACAAGAFVAG KPGALPPFGE QDVRKFVHAQ
QAAVH