| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1572 |
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| Symbol | |
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| ID | 8225143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1882452 |
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| End bp | 1884077 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644929429 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003085981 |
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| Protein GI | 255035360 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00617416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.812354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTCA AATTCAGACT TATAGCGGCC GTTGGAGCGC TGATGCTCAT GCAGGGATGC
AGCGAGGACT TCCTCGACCG CCCGCCGCTG GACGCGCTCA CATCCGGTAA CTTCTATAAA
ACCGACGACG AGATCATGGC CGGTACCGCG CCGCTTTACA ACATCGTGTG GTTCGACTTC
AACGACAAGG CCAACATGTC CTTCCAGGAA GCCCGCGCCG GAAACCTCAA TTCCAACGAC
CGTACGGCCT ACATCAAGCA CGCCATTCCG TCCACCGACG TGAACACGCT GCTGCCGGGC
TACAAATCGT TTTACAAAAT CATCGCGCAG AGCAATAATG CCTACAAGGC CATTAAAGAG
GCACAGGGAA GCACCGCTTC GGCAGCTGTG AAGGCGCAGG GGCTTGGCGA ATGCCGGTTT
ATGCGCGCCA CGGCTTACTA TTACCTGGTA ACCAACTGGG GCGCGGTGCC CATCGTATAC
GACAACGTGG CGCAGCTCAA TACGCCGCCC GTGCGCAACC GCATTGAGGA TGTTTGGAAA
CTCGTGATCC AGGACTTCCG CTTCGCTGCC GAAAATCTGC CTGCAACGGC GGTGCAGGGC
CGTTTGACCA AATATTCGGC CGAGGGAATG CTCGCCCGCA TGTACCTCAT GCGCTCGGGC
CTGAACCAGC AGGGCACACG TAACCAGTCG GACCTGGACA GCGCGAAATA CTATGCCGAA
AGCGTGATCA CCAAAAGCGG CCTCTCTCTG GCGCCTACGT ATGCGGAACT GTTTGAAAGC
GCCAACCACA ATGCGTCCAA AAACAATCCC GAGAGCCTTT TCTCCCTGCA ATGGATGCCG
GTAAGCAACC CCTGGGGCGT GAACAATTCA TTCCAGGCGT ATTTTGCCTA CGATGCCAAC
ATTACCGGCA CCGGCGACGG CTGGGGCGCG GCACAGGGGC TTTCGGCCGA CCTCGTGAAA
TACTTCACCG AAAACCCGGC GGACTCATTG CGCAGAAAGG CGATCGCGAT GTTCGATACC
GATGTGTATC CGAACATTCA GAAAGGCACC GGCGGATTGA AATACAACCG TCCGGAAGCA
TTGTCGGCCA TCAAAAAGTA CATCATCGGC TCGCCTGCTG ACAATGGCGG CCTGGGCGGT
TTCATGGCGG CGAATATCAA TTCGTACATG CTGCGCCTCG CGGAAGTGTA CCTCATTTAC
GCGGATGCCG TGCTGGGCAA CAGCGCCACC ACTTCCGACG CGAAGGCATT GGAATACTTC
AATGCCGTGC GCAAGCGGGC AGGAATGCCA GCCAAAACGT CGCTCACTTT CGAGGATATT
TTCAAGGAGA GAAGAATTGA AACCGTGTTC GAAGGCAATT CGTGGAACGA AGTCGTGCGC
TGGTATTATT TCAATCCGGC CAAAGCGATC GCCTACACCG CGGCGCAGCA CAAGGAAAAC
TACACGATGT CGTACACGGC AGGTTCTCTC AGACCTAAAA AATACAGCGT AACCTACTCG
CCGGCGGAAT ACTACCCGCT CACCGATGCC ACGCTGTACC TGCCGTTCCC AGAAGGTGAG
ATCGTGAATG CACCTTCGTT GAAGGACGAG CCGGTTGCAT TTGATTTCAG CAAACTAGTC
GACTAA
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| Protein sequence | MQFKFRLIAA VGALMLMQGC SEDFLDRPPL DALTSGNFYK TDDEIMAGTA PLYNIVWFDF
NDKANMSFQE ARAGNLNSND RTAYIKHAIP STDVNTLLPG YKSFYKIIAQ SNNAYKAIKE
AQGSTASAAV KAQGLGECRF MRATAYYYLV TNWGAVPIVY DNVAQLNTPP VRNRIEDVWK
LVIQDFRFAA ENLPATAVQG RLTKYSAEGM LARMYLMRSG LNQQGTRNQS DLDSAKYYAE
SVITKSGLSL APTYAELFES ANHNASKNNP ESLFSLQWMP VSNPWGVNNS FQAYFAYDAN
ITGTGDGWGA AQGLSADLVK YFTENPADSL RRKAIAMFDT DVYPNIQKGT GGLKYNRPEA
LSAIKKYIIG SPADNGGLGG FMAANINSYM LRLAEVYLIY ADAVLGNSAT TSDAKALEYF
NAVRKRAGMP AKTSLTFEDI FKERRIETVF EGNSWNEVVR WYYFNPAKAI AYTAAQHKEN
YTMSYTAGSL RPKKYSVTYS PAEYYPLTDA TLYLPFPEGE IVNAPSLKDE PVAFDFSKLV
D
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