Gene Dfer_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1561 
Symbol 
ID8225132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1865578 
End bp1866495 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content53% 
IMG OID644929418 
ProductDSBA oxidoreductase 
Protein accessionYP_003085970 
Protein GI255035349 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2761] Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000756973 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.805709 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACA ACCCATTACA CTGCGACCCG GAAACCGGCG TTTGCGAGCT GCCTTCGGCA 
CAAAATCAGG AATATACCGG CCCGATAGAG GCTGGCAAAA AGCCGGTCCG GATCATCTAC
TTCACCGACC CGATCTGCTC CACCTGCTGG GGCATTGAGC CGCAGCTCCG AAAACTGAAA
CTGGAATACG GCCATCTCGT GGATATCGAG TACCGGATGG GCGGCCTGCT GCCCGACTGG
ACTTACAACA GCGGGGGCAT CAGCAAACCT TCCGACGTGG CGCCGCATTG GGATGAAGTA
AGCCGCTATT ATCAGATGCC CATCGTGGGC GATGTGTGGA TCACCGACCC GCTGCATTCC
TCCTATCCGC CGTCCATCGC ATTCAAAGCC GCGCAAATGC AGGACGAAAC CAGGGCCATT
GCATTCCTGC GGAGAATCAG GGAAATGGTT TTCATCGAAA AAAAGAACAT TACCCGCTGG
GAACATCTGG CCGAGGCTGC TGAAAACGCG GGGCTGAATG CGGAAACGCT GAAACAGGAC
TGCGAAACAC GTGCAAACGA CGCATTTCAG GCCGATTTGC AACTGGCCGC GCAATGGGGC
GTCCGCGGTT TTCCGACCTT GTTTTTCGTG GACGGAAGCG GCGCACATGA AAAAGTTTAC
GGGTTCAAAC CTTATCAAAT GTTTGAAAAC GCCGTTGCCA AAATGCAATC CGGCGCGCAA
AAGAATTGGT ACAGCAAAAA CTGGCAGGAC CTTTTCAACC AATTCCCGAC CCTTACAACC
AAGGAGTTTG CCGAACTTAC CGGCCACACA TTCGAAGCCG CCGATCAGCA GCTGCATGCA
TTGCAAAAGG AAGGTTTTCT CAAATCGTTT GTGACCGAGA ATGGGATCCT TTGGAAATAT
ACCAGCCTCT CAAAATGA
 
Protein sequence
MQNNPLHCDP ETGVCELPSA QNQEYTGPIE AGKKPVRIIY FTDPICSTCW GIEPQLRKLK 
LEYGHLVDIE YRMGGLLPDW TYNSGGISKP SDVAPHWDEV SRYYQMPIVG DVWITDPLHS
SYPPSIAFKA AQMQDETRAI AFLRRIREMV FIEKKNITRW EHLAEAAENA GLNAETLKQD
CETRANDAFQ ADLQLAAQWG VRGFPTLFFV DGSGAHEKVY GFKPYQMFEN AVAKMQSGAQ
KNWYSKNWQD LFNQFPTLTT KEFAELTGHT FEAADQQLHA LQKEGFLKSF VTENGILWKY
TSLSK