Gene Dfer_1537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1537 
Symbol 
ID8225108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1838247 
End bp1838738 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content57% 
IMG OID644929395 
Product(2Fe-2S)-binding domain protein 
Protein accessionYP_003085947 
Protein GI255035326 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.73336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCAAA TTCAGACCAC CATGACGAAT ATCACATTGA AAGTAAACCG GCACCAGTAC 
TCGCTGGATG TCCTGCCCTG GGTATCGCTC CTGGACGCGC TGCGCGACCG TTTGAAACTC
ACCGGCGCGA AAAAAGGCTG CGATCACGGC CAATGCGGCG CCTGCACCGT GCTGTGCGGC
GGAAAGCGGA TACTAAGCTG CATGACGCTC GCCGTAATGA AAGACGGCTC CGAAGTAACC
ACCATCGAAG GCATTGCCAA CGGCGACGAG CTGCATCCCC TGCAAAAAGC ATTCATAGAG
CATGACGCTT TTCAATGCGG ATACTGCACG CCGGGGCAGA TATGCAGCGC TATCGGAATG
CTTGGCGAAG GGAAGGCCCA CACCCGCGAC GAGGTGAAAG AGCTCATGAG CGGAAACCTT
TGCCGCTGCG GCGCCAATGT CGGCATTATC GATGCGATAA TGGAAGTGCG GGAAGGAGGG
AACCGTGAAT AA
 
Protein sequence
MRQIQTTMTN ITLKVNRHQY SLDVLPWVSL LDALRDRLKL TGAKKGCDHG QCGACTVLCG 
GKRILSCMTL AVMKDGSEVT TIEGIANGDE LHPLQKAFIE HDAFQCGYCT PGQICSAIGM
LGEGKAHTRD EVKELMSGNL CRCGANVGII DAIMEVREGG NRE