| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1514 |
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| Symbol | |
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| ID | 8225085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1808651 |
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| End bp | 1809682 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644929372 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003085924 |
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| Protein GI | 255035303 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.550402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACATT CAACAGCAAC AGCCTCACAA ACAAATCATC ATCAAAAACC CACCGACTCG
GGGTTCGATG CATTTTCCAC CGCGCAGGAC GTAATCCGGG GCATTGACCT CACAGGTAAG
ACGATCATCG TCACAGGCGG TTACGCCGGC ATCGGCCTGG AAACCGTGAA GACATTCGCG
CAAGCCGGTG CCCGGGTGAT CGTGCCAGCC CGGGATGTCC CGAAAGCTGC CCGCAACCTG
GCCGGCATTC CCAACACAAC GGTAGAGTCT CTCGACCTTA CCAGCCCGGC TTCGATTGAT
AGTTTTGCGG CGCGGTTCTT GGAAAGCGGC CAGCCGCTGG ATATATTGGT CAATAATGCG
GGCATTATGT GGGTACCGCT TCTGCGGGAC GCCCGTGGCT ATGAATCGCA GCTCTCGACG
AACCATCTTG GTCATTTCCA GCTGACGGCC CGCTTGTGGC CGGCATTGAA ACTATCGGGA
AATGCGCGGG TGATCAGTGT GTCGTCTTTC GGTCACCATA TCGCGCCGTT CGATTTCGAC
GATCCCAATT TCGAGCAAAG GGAATATGAA ACACTGGCTG GCTACGGGCA GTCCAAAACG
GCCAACAACC TGTTCGCGGT AGCGCTCGAC CATCTCGGGC AGTCGCACGG CGTAAGGGCA
TTCTCGCTGC ACCCCGGCTC GGTGAACGGT ACCGAACTGG GGCGTGTGGC ACCGATGGAG
CTTTTCAGGC AAATGGGCAC GCACGACGCC GACGGCAATA TTTACCCGGA AGTGGCCCGG
AAGCTGAAAA CAATCCCACA GGGAGCAGCC ACGACCATCT GGTGCGCTAC CAGCCCGAAG
CTCGAAGGGC TCGGCGGGCT ATATTGCGAA AATGCGGACG TGGCGGAGGT GGATCACGGA
AATATCGCGC ACCGGTACGA CGAACCGCTC ACTTTACGCG GTGTGAAACC CTACTCGATC
GATCCCGGTA ACGCCCGCAG ACTGTGGACT TTGAGCGAGC AATTGACAGG AATTGATTTT
AAACCAAACT GA
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| Protein sequence | MEHSTATASQ TNHHQKPTDS GFDAFSTAQD VIRGIDLTGK TIIVTGGYAG IGLETVKTFA
QAGARVIVPA RDVPKAARNL AGIPNTTVES LDLTSPASID SFAARFLESG QPLDILVNNA
GIMWVPLLRD ARGYESQLST NHLGHFQLTA RLWPALKLSG NARVISVSSF GHHIAPFDFD
DPNFEQREYE TLAGYGQSKT ANNLFAVALD HLGQSHGVRA FSLHPGSVNG TELGRVAPME
LFRQMGTHDA DGNIYPEVAR KLKTIPQGAA TTIWCATSPK LEGLGGLYCE NADVAEVDHG
NIAHRYDEPL TLRGVKPYSI DPGNARRLWT LSEQLTGIDF KPN
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