| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1500 |
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| Symbol | |
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| ID | 8225071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1793754 |
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| End bp | 1795409 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644929358 |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_003085910 |
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| Protein GI | 255035289 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.36043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTAA ATAAATACTG CTGGGTAGCC GGCGCATTGC TGGCTACCTC GGCATTTGCA
CAGAAAAAAA CGGTTTCACA ACCAACATCC ATTTCCGAAA CCTGGGTGAC CGATCTGCGC
GACGGCCGCT ACCAAAACCC CGTCCTGCAC GCCGATTACT CCGACCCGGA CGCATGCCGC
GTGGGCGACG ACTTCTACAT GACCGCATCC AGTTTCGACG CGGTGCCCGG CCTGCCCATT
CTGCATTCCA AAGATCTTGT GAACTGGACG CTGATCGGCC ACGCATTGCC GAGACAAGTG
CCGATCGAGC ATTTTGAGCA AACGCAGCAT GGCAACGGCG TGTGGGCGCC GGCGATCCGG
TTTCATCAGG GAGAATTTTA TATCTACTAC CCCGACCCGG ATTTCGGCAT TTATGTCACC
AAGGCTAAAA ATGCTGCGGG GCCGTGGAGC GAGCCGGTGC TGGTGGAAGG AGGAAAAGGG
CTGATCGATC CGTGCCCGCT CTGGGACGAC GACGGGCAGG TGTACCTCGT GCACGGATGG
GCGGGCAGCC GCGCGGGCAT CAAGAGCGTG ATCACGGTGA AGAAAATGAA TGCGGAAGGC
ACCAAAGTGA CCGACGCCGG CGCGCTCGTG TACGATGGCC ACAAGATTGA CCCAACCGTG
GAAGGGCCCA AATTTTACAA AAGAAATGGC TTTTACTACA TTTTTGCCCC TGCCGGTGGC
GTGGCTACGG GCTGGCAGAT TGTGCTGCGG TCCAAAAACG TGTACGGTCC TTATGAGCGG
AAAGTAGTGA TGGCCGAGGG CAAATCGGGC ATTAACGGGC CGCACCAGGG CGCCTGGGTA
ACCACCAGCC CGGTGAACGG CAAATCGGAA GACTGGTTCC TGCATTTTCA GGACAAAAAC
GAATATGGCC GCGTGGTGCA TCTGCAACCA ATGAAATGGG TGAACGACTG GCCGGTAATC
GGCACAGACC CGGACGGGGA CGGCATCGGC GATCCCGTGC TGACGTACGC CAAACCATTG
ACCGCCAAGC AATACCCGCC CGCCACTCCG CCCGAGTCCG ACGAATTCAG CGGGCCTGCA
TTGGGAAAAC AATGGCAATG GCAGGCGAAC CCGAAAGGCA TATGGGCCAT GCCCGCGGCG
GGCTTTTTGA GATTATATAG TTACAAAACA CCCGCACAGG CGAAAAACCT CTGGGACGCC
CCAAATGTAC TGTCGCAGAA ATTTCCGGCA GAGGCATTTA CCGTCACAAC CAAATTCCGA
TTTACCCCGA ACGCCAATCT GAGCAACGAA AAGACGGGTT TGGTGATCAT CGGGCAAAGC
TATGCGAGCA TTTATCTGCG GAGCGGGAAA AATAAAATGG AGCTGGTTTA TGCCACTTGC
GCGAAAGCTG CTGACGGAAA GCCGGAAACG GAGCGCGTTT TGGCGGAATG GAAGCCGGAA
ACCGACCTGT ACCTGCGCGT GAAAGTGAGC AAAGGCGGCC AATGCACATT CAGTTACAGC
GAAAACGGCA CCGAGTTTAA AACAACCGGG GAGACATTCA AAGCGGAGCC AGGCAGGTGG
ATCGGTGCGA AAGCGGGCAT ATTCTGCACC CGCGAAACAC AAACCAACGA CTCGGGCTAT
GCAGATTACG ACTGGTTCCG ACTGACGAAA GATTAG
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| Protein sequence | MKVNKYCWVA GALLATSAFA QKKTVSQPTS ISETWVTDLR DGRYQNPVLH ADYSDPDACR
VGDDFYMTAS SFDAVPGLPI LHSKDLVNWT LIGHALPRQV PIEHFEQTQH GNGVWAPAIR
FHQGEFYIYY PDPDFGIYVT KAKNAAGPWS EPVLVEGGKG LIDPCPLWDD DGQVYLVHGW
AGSRAGIKSV ITVKKMNAEG TKVTDAGALV YDGHKIDPTV EGPKFYKRNG FYYIFAPAGG
VATGWQIVLR SKNVYGPYER KVVMAEGKSG INGPHQGAWV TTSPVNGKSE DWFLHFQDKN
EYGRVVHLQP MKWVNDWPVI GTDPDGDGIG DPVLTYAKPL TAKQYPPATP PESDEFSGPA
LGKQWQWQAN PKGIWAMPAA GFLRLYSYKT PAQAKNLWDA PNVLSQKFPA EAFTVTTKFR
FTPNANLSNE KTGLVIIGQS YASIYLRSGK NKMELVYATC AKAADGKPET ERVLAEWKPE
TDLYLRVKVS KGGQCTFSYS ENGTEFKTTG ETFKAEPGRW IGAKAGIFCT RETQTNDSGY
ADYDWFRLTK D
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