Gene Dfer_1434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1434 
Symbol 
ID8225005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1693071 
End bp1693697 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content59% 
IMG OID644929293 
Product(2Fe-2S)-binding domain protein 
Protein accessionYP_003085845 
Protein GI255035224 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.795882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0320908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCATGG CCATTGATAA CGAAGCCTCA CCCGATGCCG AGAACGAAAA CCGGCGCTTT 
TTTCTCAAAC AATCGATCGC CATTGCCGGC CTTTCGATCG CCCCGTCAGG CCTCTTGCAC
TCGGCCCCGG ACGACGGGCC GGTAGGGAAT GCGGTGAAGG TGACGATTTC GCTGATGATC
AATAGCAAAA GGAGGCGCCT GTCGGTCGAT CCGCGCATGA CGCTGCTGGA CTTGCTTCGC
GAAAACCTGG GCCTTACCGG TACCAAAAAG GGCTGCGATC TGGGTCAATG CGGGGCTTGT
ACCGTGCACG TGGACGGCCG CCGGACGCTG TCGTGCCTGA GCTTCGCGGT GATGCAGCAC
GGCCGGAAAA TCACGACCGT CGAAGGCCTC TCAAACGGTG ACCAGCTGCA TCCGTTACAG
GAGGCATTTG TGAAACACGA TGGTTTTCAA TGCGGCTACT GCACGCCGGG CCAGCTCATG
TCGGGCGTGG CCTGCATCCG CGAAGGACAC GCCGGGTCGG CAGAATCGGT CCGGGAATAT
ATGAGCGGAA ACCTCTGTCG ATGCGGGGCT TACCCGAATA TCGTGGACGC GATCCTGGAA
GTTAAAAAAG CAGGGACAAA GGTATGA
 
Protein sequence
MVMAIDNEAS PDAENENRRF FLKQSIAIAG LSIAPSGLLH SAPDDGPVGN AVKVTISLMI 
NSKRRRLSVD PRMTLLDLLR ENLGLTGTKK GCDLGQCGAC TVHVDGRRTL SCLSFAVMQH
GRKITTVEGL SNGDQLHPLQ EAFVKHDGFQ CGYCTPGQLM SGVACIREGH AGSAESVREY
MSGNLCRCGA YPNIVDAILE VKKAGTKV