Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1411 |
Symbol | |
ID | 8224982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 1661521 |
End bp | 1662288 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644929271 |
Product | 2-dehydro-3-deoxyglucarate aldolase |
Protein accession | YP_003085823 |
Protein GI | 255035202 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3836] 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0315815 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.619114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACC TGAAAAAAAG ACTGCAAAAC GGGGAAACCC TGCATGGCTG CTGGCTCAAT ACCGGCAGCT CCCTCACCGC GGAGATCGTT GGAATGGCCG GTTTCGACTG GGTGCTCATC GACCTCGAAC ACGGGGCCGG TACCGAAAAG GACGTGCTTT ACCAGTTGCA AGCGCTCGAA CACACGGCCA CGGCGGCGAT CGTGCGTGTG GAAAGTTCGG AAAGCCAGCG CATTCACCGC GTGCTCGATA TGGGTGCGGA GGGGGTAATG TGTCCCAAAA TCGTGAATCC CGAGGGGGTG CAAAAGCTCG TGCAAGGGCT GCATTACCCG CCGTTTGGCG GCCGTGGAGT GGCCAAAATG GTGCGTGCGA CAGGTTTTGG TCAGCATTTT CAGGAATATT ATGACAACAG CCGGGCCAAT ATCCTGGGCA TCGCGCAGAT CGAAACGGTG GAAGTGCTCA ACCACCTCGA CGCCGTAGCG AATACGGATG GCGTAGATGT CCTATTCATC GGCCCGGCCG ACCTGTCGAT GGAGCTCGGC ATCTTCGGGC AGTTTGATCA TCCTACGTTC CGTGACGCCG TCCGTGCCAC GTGCGAGGCC GCCCGGAAAG CGGGAAAGGC GGTAGGTATC CTGTTTTTCA ACACCAATGA ATACCAGGCC TATCACGAGC TGGGCATCCG GTTCATCGCC TGCGGCTCCG ATGCCACCTT TGTTGCAGAA GGTGCCCGCA CCATGGCCAA AAAGCTGAAC GAACTCCGTC CATCCTAA
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Protein sequence | MKNLKKRLQN GETLHGCWLN TGSSLTAEIV GMAGFDWVLI DLEHGAGTEK DVLYQLQALE HTATAAIVRV ESSESQRIHR VLDMGAEGVM CPKIVNPEGV QKLVQGLHYP PFGGRGVAKM VRATGFGQHF QEYYDNSRAN ILGIAQIETV EVLNHLDAVA NTDGVDVLFI GPADLSMELG IFGQFDHPTF RDAVRATCEA ARKAGKAVGI LFFNTNEYQA YHELGIRFIA CGSDATFVAE GARTMAKKLN ELRPS
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