Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1402 |
Symbol | |
ID | 8224973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 1651748 |
End bp | 1652614 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644929262 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003085814 |
Protein GI | 255035193 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.283594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.8016 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGCAC AATTCGAAGC ATTTCAGCCG CTACCCGAAT CCTCCTTCCG CATCTTCGGC TACGAAGTGA AGGAGTTTGA TGCGCCGTGG CATTACCATC CCGAATATGA GCTCACGGTG ATCCTGCAAA GCGAAGGTAT CCGCTACGTG GGCAACAGCA TGGAAAGTTT CGAGGCCGGC GACCTGGTGC TGCTGGGGCC GAACCTGCCG CATTGCTGGA AAAACACGCC CGACAGCGTC GGCCCGGCCA GTTCCATTGT GGTGCAGTGG CCTGCGGAAT TCATGGGAAG CGGCTGGCTG AATGTGGAGG AGTTCAAATC GATCCGCCGG CTGTTACAGC TGGCCACGCA GGGAGTGCGG TTCAATCAGG AAGTGTCGGC CCGGGTGCTG CCCATGCTGG CCGCGATGCT GGACATGCAG CCATTTCCCC GGCTGATGAA GTTCCTGGAA ATCCTGGAAC TGCTGGCGAC AGTGAAAAGC ATCCATTTGC TTTGTGAACA GGGATTTACG CACCCGCTCA ATTATGAAGA TAACCAGCGG ATCAACACCG TGTACAACTA CATCCGCGAG CATTATGCCG AGCGCATTAC GCTGGCTACG CTGGCCGGGC TCGTGCATAT GAGTGAAGAA TCATTTTCAC GGTTTTTCAG CCGGACCATG CAAAAGCCGC TCTTCACATT CCTGAATGAG TACCGCATTA ATATGGCTTC CAAAATGCTC ATCGAAACCG ACATGCAGGT CGCCGAGATC AGTTTTGCCT GCGGATATGA AAGTCCGCCC TTCTTTTTCA GGCAGTTCCG CAAATTCGGC GGCATCACGC CCGCCGCCTA TCGCAATCAG TTCCGCACGA CGGAAGCCGA AGGATAA
|
Protein sequence | MKAQFEAFQP LPESSFRIFG YEVKEFDAPW HYHPEYELTV ILQSEGIRYV GNSMESFEAG DLVLLGPNLP HCWKNTPDSV GPASSIVVQW PAEFMGSGWL NVEEFKSIRR LLQLATQGVR FNQEVSARVL PMLAAMLDMQ PFPRLMKFLE ILELLATVKS IHLLCEQGFT HPLNYEDNQR INTVYNYIRE HYAERITLAT LAGLVHMSEE SFSRFFSRTM QKPLFTFLNE YRINMASKML IETDMQVAEI SFACGYESPP FFFRQFRKFG GITPAAYRNQ FRTTEAEG
|
| |