Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_1368 |
Symbol | |
ID | 8224939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 1604899 |
End bp | 1605468 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644929229 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003085781 |
Protein GI | 255035160 |
COG category | [S] Function unknown |
COG ID | [COG3296] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.000513137 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.127219 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC TAAGCATCTC GGAACAAATC AAAACCCTGC GCCGCGCGAA GGGACTTTCG CAGGAAAACC TGGCCGAAAG CGCCCGCATC AACCTGCGCA CATTGCAACG CATCGAAGCC GGCGACACCA TCCCGCGCGG CGAAACGCTC CGCCTCCTCG CCCAGGTGCT CGACGTGCGT GTTGAAAGCC TCACACCTAC CCTCGCAGAG GACACCGCCT TTCTCAAACT CCTGAACCTC TCCGCATTGG CATTCTGGAT CTTTCCGTTC GGTAATGTAA TTGTACCGCT CGTACTTTGG ATCAATAAAC GCAACGAGGT CGCCGGAGTG ATGGGCCTCG GCAAGAGAAT CCTGAATTTT CAGATCACGT GGTCGATACT CGTGTACGGA TTTACGACGG TTACCATCAT CGGCCTCATG TCCGGACAAT TCTTCTTCCA CCCTTTCCTA ATGGTCGGTT TCTGCTTTCT AATGGCGTTC CTGAACACCG CGGTGATCCT CACAACCCAT TTCCGGATCG TGAAGGGCGA AGGGGATTAT TACGGGATAG GGCTGCGGAT CATTCAATGA
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Protein sequence | MSKLSISEQI KTLRRAKGLS QENLAESARI NLRTLQRIEA GDTIPRGETL RLLAQVLDVR VESLTPTLAE DTAFLKLLNL SALAFWIFPF GNVIVPLVLW INKRNEVAGV MGLGKRILNF QITWSILVYG FTTVTIIGLM SGQFFFHPFL MVGFCFLMAF LNTAVILTTH FRIVKGEGDY YGIGLRIIQ
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