| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1353 |
|---|
| Symbol | |
|---|
| ID | 8224924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 1591153 |
|---|
| End bp | 1591806 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644929214 |
|---|
| Product | bifunctional deaminase-reductase domain protein |
|---|
| Protein accession | YP_003085766 |
|---|
| Protein GI | 255035145 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0262] Dihydrofolate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.137932 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAGA TCATCACCAA CACATTCGCG ACATTAGACG GCGTTATTCA GGCACCCGGC
GGCCCCGAGG AAGACCGTGC CGGCGGCTTT GAGCTCGGCG GATGGTCGTT TCACTACTGG
GACGAAATCA TGGGCCAGGT CATGGACGAG GGGATGAGCC GGCCCTACGA CCTGTTGCTA
GGCCGTAAAA CGTACGATAT TTTCGCCGCC CACTGGCCGT TCATGGAAAA CGACCCCACC
GCCGAGCAGT TCAATGCCTG CAACAAATAC GTGGCGACGC AAACGCTGAA AGATGCGACC
TGGCAAAACA CGGTGCTGCT CAATGGCGAC ACGCTTGCGC AATTGAAGGC CCTCAAATCC
GAGGACGGCA TCGACTTGCA GGTACATGGC AGCGCCGATT TTATCCAGAC GCTCCTCCGC
CACAACCTGA TCGACGAAAT GAATATCTGG ATCTTCCCAC TCGTGATCGG TCAAGGCAAA
AAGCTGTTTG CCAACGGCAC AGTCCCGTCC AATCTCAAAC TGACAAAACA CAGCGTATCA
AGCACCGGCG TCATCATGAC AACCTACGTG CCCGATGGCG AGATTAAAGT GGGTTCTTTT
GCACTGGAAG AGCCTACTGA GCTGGAAATC AAGCGAAGGG AAAGTGGAGT GTAG
|
|---|
| Protein sequence | MRKIITNTFA TLDGVIQAPG GPEEDRAGGF ELGGWSFHYW DEIMGQVMDE GMSRPYDLLL
GRKTYDIFAA HWPFMENDPT AEQFNACNKY VATQTLKDAT WQNTVLLNGD TLAQLKALKS
EDGIDLQVHG SADFIQTLLR HNLIDEMNIW IFPLVIGQGK KLFANGTVPS NLKLTKHSVS
STGVIMTTYV PDGEIKVGSF ALEEPTELEI KRRESGV
|
|---|
| |