Gene Dfer_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1289 
Symbol 
ID8224860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1519812 
End bp1520945 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content58% 
IMG OID644929150 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_003085702 
Protein GI255035081 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.306648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.411333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGA TTAGAAAGAC GATATTCGAC CCTGCCGAAA TGCAGGGTAA AGCCTTGGCA 
AACAGGTTGG TGGTAGCACC GATGACGCGC GTAAGCGCCA CAGCCGCGGG CGTGCCTACA
CAGGAAATGG CGGACTATTA CGAAGCATTT GCCGCCGGGG GCTTCGGAAT GATAATCACC
GAAGGTACTT TCACCGACAC GCTGTTCAGT AAGGCGAACT ACGATCAGCC AGGACTCGTG
AATGCGGAAC AAATGGAGGG CTGGAAACGG GTGGCCGACG CCGTGCACCA GCACGATGCG
GTGATCATCA GCCAGCTGAT GCATGCCGGC GCATTGTCGG AGTTCAGCGA CGAAACGATC
GCGCCTTCGG CCGTGAGGCC CGTAGGTTTG CGAACAACGG ACTTCACCAG CGCTCCAAGT
CCTTTTCCAG TGCCCCGGGC AATGCAGCAG GAGGATTTTC AAAATGTCAG GGAAGGTTAT
GTAAATGCCG CCTTACTTGC ACAGCAGGCT GGTTTCGATG GCGTGGAGCT GCATGCGGCC
AACGGTTACC TGTTCGACCA GTTCATTACC CCGCATACCA ACCTCCGAAC CGACCAATAC
GGCGGCGACG AGCGGAACAG GCTGCGGTTT CTGATGGAAG TATACCAGGC GGTGAAAGCG
GCATTGCCGG AACGTTTTAT CGTGGGTATC CGGCTTTCGG AGAGCAAGGT GAACGACCTC
ACTTACCGCT GGCCGGGCGG GTCGGCCACG GCGCGACGGC TTTTTGAAGT ACTTTCTGAA
ATTAACCCGG ATTACGTGCA TATTGCTGCG GAAGGCGGCC GCTGGGAACG CGAATGCCTC
TATCCGGACG GCCTTTCGTC CAACAGCATT GCCAAAAGCA TTCTCCGATC GCCCGTGATC
GCCAATGGCG GAATGCATGA CGTAGCATTG GCCGAAACGC TGCTGAATAG CGGTGCGGCC
GACCTTGTGT CCATCGGCCG CGCCGCTATT GCCACGCCCG ACTGGCCGCA GCGCATTGCC
GCGGGCGAAC CGGTGGTGCC GTTTTACAAG GAGCTCATCA AGCCCAGCCT TACGCTCGCC
CATACGCGAC GTGTGAAAGC ACAGCAGCAA GAGTCGGACC TGTGTTTGTC ATGA
 
Protein sequence
METIRKTIFD PAEMQGKALA NRLVVAPMTR VSATAAGVPT QEMADYYEAF AAGGFGMIIT 
EGTFTDTLFS KANYDQPGLV NAEQMEGWKR VADAVHQHDA VIISQLMHAG ALSEFSDETI
APSAVRPVGL RTTDFTSAPS PFPVPRAMQQ EDFQNVREGY VNAALLAQQA GFDGVELHAA
NGYLFDQFIT PHTNLRTDQY GGDERNRLRF LMEVYQAVKA ALPERFIVGI RLSESKVNDL
TYRWPGGSAT ARRLFEVLSE INPDYVHIAA EGGRWERECL YPDGLSSNSI AKSILRSPVI
ANGGMHDVAL AETLLNSGAA DLVSIGRAAI ATPDWPQRIA AGEPVVPFYK ELIKPSLTLA
HTRRVKAQQQ ESDLCLS