Gene Dfer_1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1251 
Symbol 
ID8224822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1481977 
End bp1483134 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content54% 
IMG OID644929113 
Productprotein of unknown function DUF323 
Protein accessionYP_003085665 
Protein GI255035044 
COG category[S] Function unknown 
COG ID[COG1262] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03440] conserved hypothetical protein TIGR03440 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.499599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.335829 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCA CCGGCATTAG GGAAGCATTT CACAATGTCA GAAAACACAC GGAATACATT 
TGCGAGCCGC TCGAAACGGA AGATTACGTG CCGCAGCCGG TCGCATTTGT GAGCCCGCCG
AAATGGCACC TCGCGCATTC CACCTGGTTT TTTGAAACCT TCATCCTCAA ACCCAATGTA
CCCGGCTATC GGATGTACGA TCCCGATTTC AACTATTTGT TCAACAGCTA CTATAATAAT
GTAGGCGAGC GCAGCCTCCG CACCGATCGC GGGAACGTGA CACGCCCGAC CACCAAGGCC
GTGTACGCCT ACCGCCAATA TGTGGATGAG CAAATGGACG CATTTCTCGA AGATCTCACC
GATCCGGACA TCCTGGCATT GGTCGAACTC GGGCTGCACC ACGAGCAACA GCACCAGGAA
CTGCTCGTGA CCGACATCAA ATACATTCTC GGCCACAACC CGCTCTTCCC CGTTTACCGC
GAAGGCCAGA ATATGGTGAG CGGCCGCAAT ACCGAAACCG GCTTTTTAAC CATTCCTGAG
GGCATCTACG ACATCGGGCA CCAGGGCGAA GGTTTCTGCT TCGACAACGA ACTCGGCCGG
CACAAGGTAT ACCTGCACGA ATTCGAAATC GCGAAAGGAC TCGTCACCAA TAAAGAATAC
CTCGCATTTA TGGAAGCCGG GGGTTATCAG GATTTCAACC TTTGGCTGGA TGAAGGCTGG
TCTTGGGTAA ATGAAAACCA CATTTCAGCA CCAATGTACT GGCACCGGAT CGGCGGCGAA
TGGCATTACT TTACATTAAA CGGGTTGCGA AAAGTCGATC CCGACGCCAT TCTGAGCCAT
GTCAGCTATT TCGAAGCCGC TGCATTTGCT CAGTGGAAAG GCATGCGACT ACCGACCGAA
TTTGAATGGG AAATTGCCGC CGCTAACCTC GACTGGGGCC AGCGGTGGGA ATGGACCAAC
AGCGCCTACC TGCCCTATCC TGGATTCTCG AAAGCGCCGG GCGCCGTGGG CGAGTACAAT
GGCAAGTTTA TGGTGAACCA GATGGTGCTC CGCGGCGCGT CCGTAGCGAC CTCGCCGGGG
CACGCCCGCA AAACATACCG CAATTTTTTT CACACACACG AGCGCTGGCA ATACACAGGT
ATCCGCCTCG CGCAATAA
 
Protein sequence
METTGIREAF HNVRKHTEYI CEPLETEDYV PQPVAFVSPP KWHLAHSTWF FETFILKPNV 
PGYRMYDPDF NYLFNSYYNN VGERSLRTDR GNVTRPTTKA VYAYRQYVDE QMDAFLEDLT
DPDILALVEL GLHHEQQHQE LLVTDIKYIL GHNPLFPVYR EGQNMVSGRN TETGFLTIPE
GIYDIGHQGE GFCFDNELGR HKVYLHEFEI AKGLVTNKEY LAFMEAGGYQ DFNLWLDEGW
SWVNENHISA PMYWHRIGGE WHYFTLNGLR KVDPDAILSH VSYFEAAAFA QWKGMRLPTE
FEWEIAAANL DWGQRWEWTN SAYLPYPGFS KAPGAVGEYN GKFMVNQMVL RGASVATSPG
HARKTYRNFF HTHERWQYTG IRLAQ