| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1232 |
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| Symbol | |
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| ID | 8224803 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1463369 |
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| End bp | 1464208 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644929094 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003085646 |
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| Protein GI | 255035025 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.523448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00338141 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATTCCA GGAGAACATT TGTCAAGAAA GGCATTGCCG GACTGATGGC AGGCAGCATT
GTGCCATTTT CGGAAAAAGT GAATGCAGCC GGAACGCCGG CTAAAAAGGA AGATACCTTT
AAGCTCGGAG TAGCCGGTTA CAGTTTCTAT CATTTCAAAC TTGATGAAGC ACTTGAAATG
ATGAAGAAGA CAGATGTTCA TTTCCTGTGT ATCAAGGACT TCCATTTGCC TTATAACAGC
ACGGCGGAGC AGATCACCGC TTTTCATCAG AAGCTCAAAG ACGCGGGTGT TACCGGCTAT
GCCGTCGGGC CGATTTATAC GAAGACGCAC CAGGACATCG ATAACGCATT CGATTATGCC
AAGCGCGTAG GTGTGGATCT CATCGTCGGC ATTCCTAACC ATGACGATTT GAAGTATGTG
GAGCAGAAAG TGAAGGAAAC CAATATCCGC TACGCCATTC ACAACCACGG GCCGGAGGAT
AAGTTGTATC CCAATGCGAC CTCAGTTTAC AATCACGTCA AAGATCTCGA TCCGCGGATC
GGCCTTTGCT TCGATATGGG CCATAACCAG CGTGACAACC AGGACCCGGT CACGGATTTA
GGGAAATACA GCAAGCGTAT TTTCGACATA CACCTTAAAA ACGTGACTGC CGCAACGAAA
GACGGCAAAA CCTGTGAATT GGGTCGCGGG ATTATTGATA TTCCAGCGTT TGTGAAAATG
CTGCGGAAAG TGAAGTACTC TGGTTCATGC AGCCTTGAAT ATGAGAAAGA TATGAAGGAC
CCATTGGCCG GCATTGCCGA GTCGGTTGGT TATTTCCGGG GCGTTTGCCA GGCGAGTTAA
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| Protein sequence | MNSRRTFVKK GIAGLMAGSI VPFSEKVNAA GTPAKKEDTF KLGVAGYSFY HFKLDEALEM
MKKTDVHFLC IKDFHLPYNS TAEQITAFHQ KLKDAGVTGY AVGPIYTKTH QDIDNAFDYA
KRVGVDLIVG IPNHDDLKYV EQKVKETNIR YAIHNHGPED KLYPNATSVY NHVKDLDPRI
GLCFDMGHNQ RDNQDPVTDL GKYSKRIFDI HLKNVTAATK DGKTCELGRG IIDIPAFVKM
LRKVKYSGSC SLEYEKDMKD PLAGIAESVG YFRGVCQAS
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