Gene Dfer_1226 details

Gene Information

• Locus tag: Dfer_1226
• Symbol: dnaK
• ID: 8224797
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dyadobacter fermentans DSM 18053
• Kingdom: Bacteria
• Replicon accession: NC_013037
• Strand: +
• Start bp: 1455387
• End bp: 1457306
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 644929088
• Product: molecular chaperone DnaK
• Protein accession: YP_003085640
• Protein GI: 255035019
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0242304
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.00191345
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGGAAAAA TTATTGGCAT AGACTTAGGA ACAACGAACT CCTGCGTGGC TGTCATGGAG 
GGTAACGAGC CGGTTGTAAT AGCCAACAGC GAAGGTGCCC GCACTACCCC TTCCGTAGTT 
GCATTCATGG ATAATGGTGA ACGCAAAATC GGAGCACCGG CCAAACGTCA GGCGATTACG 
AATCCCAAGC ATACTATTAG CTCCATCAAG CGTTTCATGG GTAAAAAATA CGATGACACA 
ACGTCTGAAA TGAAGACCGT TGCGTACTCC GTCGAAAAAG GCCCTAACAA TACCCCACGC 
ATTCCAATCG GCGACCGCCT GTACACGCCA CAGGAAGTTT CTGCATTCAT TCTCCAAAAA 
ATGAGACAAA CTGCGGAAGA CTATCTGGGT CAGGAAGTTA CAGAAGCGGT GATCACCGTT 
CCTGCGTATT TTAACGATGC GGAACGCCAG GCTACCAAAG AAGCTGGTCA GATTGCCGGT 
CTGGATGTAA AACGTATTAT CAACGAACCT ACTGCTGCTG CCCTGGCTTA CGGCCTCGAC 
AAACAGCATA AGGATATGAA AATCGCCGTG TTTGACTTGG GTGGTGGTAC TTTCGACGTA 
TCTATCCTTG AACTGGGCGA CGGTGTATTT GAAGTAAAAT CTACCGACGG TGATACCCAC 
CTGGGTGGTG ACGACTTCGA CCAGGTGATC ATCAATTGGC TGGCCGACGA GTTCCAAAAG 
GACGAAAACG TGGACCTGCG CAGAGATCCA ATGGCATTGC AGCGTTTGAA AGAAGCTGCT 
GAAAAAGCGA AAGTTGAATT GTCGAGCTCT ACGCAGACTG AAATCAACCT GCCTTATATC 
TTCCCGGTAG ATGGTATTCC AAAGCACTTG GTTCGCACCT TGACCCGCGC GAAATTCGAG 
CAATTGGCTG ATACGCTCTT CCAACGCATG ATGGAACCTT GCAAGAGAGC GATGAAAAAC 
GCAGGATATT CGAACAGCGA TATCGACGAG GTGATCCTCG TAGGTGGTTC GACCCGTATT 
CCTCGCGTAC AGGAAGAAGT AGAGAAGTTC TTTGGTAAAA AACCTTCGAA AAACGTTAAC 
CCGGACGAAG CTGTGGCCGT AGGTGCTGCA ATCCAGGGTG GTGTATTGAC TGGTGAAGTG 
AAAGACGTAC TTCTTTTGGA CGTAATTCCT TTGTCACTCG GTATCGAAAC ATTGGGTGGT 
GTGTTCACCA AGCTGATCGA AGCGAACACC ACTATTCCAT CGAAGAAAAC CGAAACATTC 
TCAACTGCTG CTGACAACCA GCCATCTGTG GAGATCCACG TATTGCAAGG TGAGCGTCCG 
CAAGCTTCCA ATAACCGTAC ACTCGGCCGT TTCCACCTTT CGGATATTCC GCCAGCACAA 
CGCGGTGTAC CTCAGATCGA AGTAACATTC GACGTGGATG CGAACGGTAT CCTGCACGTA 
TCAGCGAAAG ACAAAGGAAC CGGCAAAGAG CAGAAGATCC GCATCGAAGC TTCCAGCGGT 
TTGACCGACG CTGAAATCGC CAGAATGCGT GAAGAAGCGA AAGCAAACGA AGCTGCTGAC 
AAAGCAGAAC GTGAAAAAAT CGAAAAAATC AACGGAGCTG ACAGCCTGAT CTTCTCGACT 
GAGAAACAGC TGAAAGAATA TGGCGACAAA CTTTCTGACA GCAACAAGTC GAGCATCGAA 
GCTGCATTGG CAGAGCTGAA AACCGCTCAC CAATCGCAGG ATCTGACCGC GATCGACGCT 
GCATCCGAAA AACTGAATGC GGCATGGCAA GCTTCGGCGC AGGAAATGTA CGCTCAGGGC 
GGTGAACAGC CCGGCGGCCA GCCTGGCGCA GGCGGCCCAA CCGGAAATCC GGGAGCAGGT 
GCCGGCAACA GCGGTTCGAC TGACGACGTA ACGGACGTTA ATTTCGAAGA GGTAAAATAA 

 

Protein sequence

MGKIIGIDLG TTNSCVAVME GNEPVVIANS EGARTTPSVV AFMDNGERKI GAPAKRQAIT 
NPKHTISSIK RFMGKKYDDT TSEMKTVAYS VEKGPNNTPR IPIGDRLYTP QEVSAFILQK 
MRQTAEDYLG QEVTEAVITV PAYFNDAERQ ATKEAGQIAG LDVKRIINEP TAAALAYGLD 
KQHKDMKIAV FDLGGGTFDV SILELGDGVF EVKSTDGDTH LGGDDFDQVI INWLADEFQK 
DENVDLRRDP MALQRLKEAA EKAKVELSSS TQTEINLPYI FPVDGIPKHL VRTLTRAKFE 
QLADTLFQRM MEPCKRAMKN AGYSNSDIDE VILVGGSTRI PRVQEEVEKF FGKKPSKNVN 
PDEAVAVGAA IQGGVLTGEV KDVLLLDVIP LSLGIETLGG VFTKLIEANT TIPSKKTETF 
STAADNQPSV EIHVLQGERP QASNNRTLGR FHLSDIPPAQ RGVPQIEVTF DVDANGILHV 
SAKDKGTGKE QKIRIEASSG LTDAEIARMR EEAKANEAAD KAEREKIEKI NGADSLIFST 
EKQLKEYGDK LSDSNKSSIE AALAELKTAH QSQDLTAIDA ASEKLNAAWQ ASAQEMYAQG 
GEQPGGQPGA GGPTGNPGAG AGNSGSTDDV TDVNFEEVK