Gene Dfer_1217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1217 
Symbol 
ID8224788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1444626 
End bp1445039 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content52% 
IMG OID644929079 
Productprotein of unknown function DUF55 
Protein accessionYP_003085631 
Protein GI255035010 
COG category[S] Function unknown 
COG ID[COG2947] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.02485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000132613 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCATT GGCTTGTAAA ATCAGAACCA TTTAAATACT CCTGGGACCA TCTTGTGGCA 
GAGGGTGAAG GCATGTGGGA CGGCGTGCGC AACTACGCGG CCCGCAATAA CCTGATGGCG
ATGAAAGTCG GTGACCCCGT GCTGTTTTAC CACAGCAACG AGGGAAAAGA GGTTGTAGGG
CTGGCAAAGG TTTCCAAAGA ACATTACCCC GACCCTACCA CCGACGAACC CGGCTGGGTG
GTCGTGAATG TGGTTCCTAT TGAGAAATTT CCCAACACCG TCACACTGGC GCAGATCAAA
AAGGACGAGC TTTTGAAACA AATGGACCTG GTCCGGTTGT CGCGCCTGTC GGTAGTGCCG
GTCAAACGCG AAGAATTCGA CCATATCGTT GCATTGGCGC ATGACAAGAA ATAA
 
Protein sequence
MNHWLVKSEP FKYSWDHLVA EGEGMWDGVR NYAARNNLMA MKVGDPVLFY HSNEGKEVVG 
LAKVSKEHYP DPTTDEPGWV VVNVVPIEKF PNTVTLAQIK KDELLKQMDL VRLSRLSVVP
VKREEFDHIV ALAHDKK