| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1187 |
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| Symbol | |
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| ID | 8224758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1409997 |
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| End bp | 1412012 |
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| Gene Length | 2016 bp |
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| Protein Length | 671 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644929049 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_003085601 |
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| Protein GI | 255034980 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.491713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCG ACGAAAAAAC CACGACGCAT ACCGACGATT GTTGCTCGGC AGAAAAGCAT
AACCATAGCC ATCAAAGCAG CCGGCAAAAT AGCCATGAAC ATGACCACGA TCACAGCCAT
GACCATGATC ACGATCACGA CCATAGTCAC GGCGCGGGTG CAAGTGCCGG TTTACTGCGC
AGCCGCTGGA TGCTTTGGCT TAGCCTGGCG ATCCTTGGCG TGTTCCTCGT CCTGAATTAC
ATCGCCGATG TATTTGTGCC GCGCTCCGTC GAGATTGTGA TGATGCTTGC TGCATACGTG
CTTGCGGGGA ACAAGACGGT GTCCCTTGCA TTCAGAAAAG CCAGTCGCGG GGATTTTTTC
AATGAATTTA CATTGATGAC CATCGCCACG TTCGGCGCTT TTTACATTGG TGAATTCAGC
GAGGGTGTTG CGGTGATGAT ATTTTATGAA ATCGGAGAGC TTTTTCAGGA CTTGGCCGTG
AGCCGGTCAA AACGGTCGAT TAAGGCGCTG CTCGACATTC GTCCCGACAC CGTGACCGTT
TTGCGCGGCG ACAAACCCAT GCAAGTCCGG CCGGACGATG TGCGCATCGG CGAGACCATA
CTCGTCAAAC CCGGCGAAAA AGTGGCGCTG GACGGTGAAA TGCGCGCTGC GTCGGGCACA
TTCAACACCG CCGCACTCAC CGGCGAGCCA AAGCCGCAGG TCATTGAACA AGGTGAGAAA
GTGCTGGCAG GGATGATTTC GATCGAAAAA TCAGTTGAGA TAGAAGTAAA GGCGCTTTTC
AAAGATTCCA AACTCTCGCG TATACTGGAA ATGGTGCAGG AGGCAAGCGC GCGCAAAGCC
CCTACCCAAC TGCTGATCAG CCGTCTCGCA CGCATTTACA CACCCGCGGT ATTTCTTCTC
GCATTGCTCA TCATAGTAAC GCCCGCCATT TTTGTAACAG ACTACCAGTT CGACCAGTGG
CTCTACCGCG GCATGGTTTT CCTCGTGATC GCCTGCCCCT GCGCATTGAC GATCTCCATT
CCGCTCGGAT ATTTCGGCGG CATCGGATTG GCCTCGCGAC ATGGCATTTT AGTGAAAGGC
GCTAATTTTC TGGACATTAT CACTAAAATC GACACGGTGG TTTCGGACAA AACCGGCACG
CTCACGAAAG GCGTTTTCCA GGTTCAGGTA ATCGAAACGG AGCTGGACAA GAGCGAATTT
ATACGCATAG CGGCGTCTCT GGAAAGCTAC TCCACGCATC CTGTTGCCAA AGCGGTGGTG
ATGGCAGCCG CTGATTTGGC ACTTTCGAAG CCGGTTGAAG TGGAAGAAAT AGCGGGGCAC
GGCTTGAAGG GCCAGGTGGA TGGCCGGGCC GTTCTGGCGG GCAATGCTAA ACTGCTCGAT
CAGAACGGGA TCAGCTATCC GGCGGAACTT GCCTCGCTGG TGGAAACGGT CGTGATCGTG
GCGATAGATA ACCGTTATGC CGGCTATTTC CTCATCGCCG ACGAGATTAA GGATGACGCC
TCCCTCGCGG TTTCAGATCT GAAAAGCTTG GGCATTACGA CTATTATGCT TTCGGGTGAT
AAAGAGGCTG TTGTGACCAA AGTTGCCCGC GAGCTGGGTA TTGCGAAAAG TTACGGCGGA
TTGCTGCCCG AAGACAAGGT GCGCATCGTA CAATCGCTAA AAGACCAGGG AAAACACATT
GCATTCGTGG GCGATGGCGT CAATGACGCA CCGGTGATCG CCCTGGCCGA CGCCGGGATA
GCCATGGGAG CGCTCGGCTC CGACGCCACC ATCGAAACCG CCGACATTGT GATCCAGAAC
GACCAGCCGT CACGCATCCC TGCGGCTGTG CGGATCGGGA AGATCACAAA ATCCGTCGTT
TATCAGAACA TTTCGCTGGC AATGGGGGTT AAAATTGCGG TGATGGCACT CGGTGCGGGC
GGCGTGGCAA CGCTCTGGGA AGCGGTGTTC GCAGATGTGG GCGTGGCATT GCTCGCAATT
CTGAATGCCT ATCGCATTCA GGGAAAGAAA GTATAG
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| Protein sequence | MKFDEKTTTH TDDCCSAEKH NHSHQSSRQN SHEHDHDHSH DHDHDHDHSH GAGASAGLLR
SRWMLWLSLA ILGVFLVLNY IADVFVPRSV EIVMMLAAYV LAGNKTVSLA FRKASRGDFF
NEFTLMTIAT FGAFYIGEFS EGVAVMIFYE IGELFQDLAV SRSKRSIKAL LDIRPDTVTV
LRGDKPMQVR PDDVRIGETI LVKPGEKVAL DGEMRAASGT FNTAALTGEP KPQVIEQGEK
VLAGMISIEK SVEIEVKALF KDSKLSRILE MVQEASARKA PTQLLISRLA RIYTPAVFLL
ALLIIVTPAI FVTDYQFDQW LYRGMVFLVI ACPCALTISI PLGYFGGIGL ASRHGILVKG
ANFLDIITKI DTVVSDKTGT LTKGVFQVQV IETELDKSEF IRIAASLESY STHPVAKAVV
MAAADLALSK PVEVEEIAGH GLKGQVDGRA VLAGNAKLLD QNGISYPAEL ASLVETVVIV
AIDNRYAGYF LIADEIKDDA SLAVSDLKSL GITTIMLSGD KEAVVTKVAR ELGIAKSYGG
LLPEDKVRIV QSLKDQGKHI AFVGDGVNDA PVIALADAGI AMGALGSDAT IETADIVIQN
DQPSRIPAAV RIGKITKSVV YQNISLAMGV KIAVMALGAG GVATLWEAVF ADVGVALLAI
LNAYRIQGKK V
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