| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1181 |
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| Symbol | |
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| ID | 8224752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1404732 |
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| End bp | 1406126 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644929043 |
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| Product | Pyridoxal-dependent decarboxylase |
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| Protein accession | YP_003085595 |
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| Protein GI | 255034974 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.823264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAAC TGTTTGAAAA TGAGTTAAAT AACCTGAATG CGATTTTGGA TCAGGTTAAA
AACAATAGCC TCGATTTTCT GGAAAAGATT GTCGACAGGC CTACCTATAT CGCCGATCAG
TCGATTGTGC CCGGAGATTT GCCGGAAGCC GGAATTGGCG CGCTGGGAAG TCTGGACTTT
TTTAAAAAGC ACTACGAAAA ACTGATGGTA GCCAGCCCCG GACCGCGTTA CTGGGGCTTC
GTGACGGGCG GAGCGACGCC CGCAGCTATT GCGGGTGACT GGCTTACAGC TGTTTACGAT
CAAAATACGC AGAGTACGCA AGGTGCAGGC GATGTCTCAG CGATTGTTGA GAAAGAGACA
ATGCGGCTGC TTTACCAGCT GCTGCATTTG CCGGACCATT TCGAAGGTGG CTTTGTGACG
GGCGCTACCA TGTCCAATTT TACGGGACTG GCCGTGGCCC GGCAATGGGC CGGTGCCCTA
TCGGGCCGTG ACGTTGCGCG TGAAGGGGCC GTCGGCGACG TGGCCGTGCT CGCTGCCACG
CCGCATTCGT CGGTGCTGAA ATCGCTGGCG ATGCTCGGGA TAGGCAGCAA TCAAGTCGTG
CAAATCGGGA CGATGCCGGG TCGCGAAGCG ATGGACCTGG CTGATTTTGA ACAGAAACTG
ACTGAAAACC AGGGGCGGCC TATCATCGTC AATTGCAGTG CCGGAACGGT AAACACTGTG
GATTTTGACG ACATTGCAGC GATCGCGGCG TTGAAGCAGC GGTACCGTTT CTGGCTGCAC
ATCGACGCTG CTTTTGGCGG ATTTGCCGCT TGCTCATCCG CCTATTGCCA TTTGCTAAAT
GGTTGGGAAC ATGCGGATAG CATTACGATC GACTGCCACA AATGGATGAA TGTGCCCTAC
GACAGCGCCG TAGCGTTGGT CAGGAAAGAG CACAACCGAT TGCAGGTCAG TGCATTTCAA
AATTCCAATG CACCTTATCT GGGCGATCCG TCCGAAAATT TCTCCTACCT CAATTTCCTG
CCCGAAAACT CCCGGCGTTT TCGCGCATTG CCGGCCTGGT TCAGCCTCAC GGCCTATGGT
CGGAAAGGGT TTGAATGGAT TGTGGAGAAC AGCATCGCGT GTGCGCAGGC GCTGGGCAAC
TATATCGAAA CCAGTGCGCA TTTTGAACTG GCGGCGCCGG TACGGCTCAA TGTGGTGTGT
TTCCGTTTGA AAAAAGACAC GGAGAAAATG CCGCTGTTTC TGAAAGAACT CAACCGCCGC
GGAAAAGTTT TTATGACGCC GACTTCGCTG TCGGGCGAGC CCGCTTTACG AGCTGCGTTT
GTTAATTACC GAACGGGAAA ACAGGACATT TTGATAGCCA TTCGCGAAAT GGAAGAAGTA
ATGTCGGCGC TGTGA
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| Protein sequence | MFELFENELN NLNAILDQVK NNSLDFLEKI VDRPTYIADQ SIVPGDLPEA GIGALGSLDF
FKKHYEKLMV ASPGPRYWGF VTGGATPAAI AGDWLTAVYD QNTQSTQGAG DVSAIVEKET
MRLLYQLLHL PDHFEGGFVT GATMSNFTGL AVARQWAGAL SGRDVAREGA VGDVAVLAAT
PHSSVLKSLA MLGIGSNQVV QIGTMPGREA MDLADFEQKL TENQGRPIIV NCSAGTVNTV
DFDDIAAIAA LKQRYRFWLH IDAAFGGFAA CSSAYCHLLN GWEHADSITI DCHKWMNVPY
DSAVALVRKE HNRLQVSAFQ NSNAPYLGDP SENFSYLNFL PENSRRFRAL PAWFSLTAYG
RKGFEWIVEN SIACAQALGN YIETSAHFEL AAPVRLNVVC FRLKKDTEKM PLFLKELNRR
GKVFMTPTSL SGEPALRAAF VNYRTGKQDI LIAIREMEEV MSAL
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