| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1132 |
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| Symbol | |
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| ID | 8224703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1346252 |
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| End bp | 1348195 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644928994 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003085546 |
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| Protein GI | 255034925 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0372822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.204987 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATA CAAAGATTTT GTTGCTGGAT GACCGGGAGG AAAACCTGAT CTCCCTCAAA
GCGATCCTCA ACCGGGACGA TATCGAAATA TACGCCACTA CCTCGCCGAA CGAAGCCCTG
CGCATGGTTT GGGAAAGCGA TATCGCCGTG GCCCTGGTAG ATGTACAAAT GCCCGGAATG
GATGGTTTCG AGTTTGCAGA GACGCTTTTT TCCAACCCCA AAACCCGCGA AATCCTGATC
GTTTTCGTGA CGGCCATTTC CAAAGAAACG ACCTATGCCG TGCGGGGGCT CAAAACAGGT
GCGATCGATT ACCTCTACAA GCCGCTGGAT CCTTACATTA CCAATGCTAA GGTTGACTCG
CTGATCAAGC TCGCGCGCAG CCAGCGTGAG ATCCGGGATA AGAACAAACT GCTCGAAAAT
TACGCGACGA TTGTCCTCAA TTCTCCGGAC ATTATCGCCA CCGTGGAGCC GGATACCGGA
TCAATTTTGT CCATTAACCC TTCCGTGGAG GCGATTCTAG GCATTAGTCC GCAGTCGTTG
ATCAAAACGT CGGTGCTGGA CCTGCTCGTA GATCCGCTGA ATTCCGCATT GCGCGAAGTG
CTCGTGAAAA GGAGCTTTGT AGGCGGGGAG ACGATCGTGG TGGAGGACCA GTTCTATGGC
CGCCTGCGGC AGCCGGTTTG GCTGGAACTG CGGATTATGT ACAAAAACCG CCTGCTGTTT
GTGAACCTCC ACGATGTCGA AAAACGCAAA GCGCACGAGC TGGCGCTGAT CGACGCGCAG
GCGCAGGCCG AGAAAGCACG GAAAACGAAG GAATCGTTTC TGGCGAATAT GAGCCACGAG
ATCCGCACGC CGCTCAATGG CATTATCGGG CTGGGTAACC TGCTCGCAGC GACGGAGCTC
AGCGAGGCCC AGGCCGAGCT GGTGGATATG CTCCGCCAAT CGTCCGGCTC GCTGCTGAAT
ATTCTGAATG ATATTTTAGA TATTTCCAAA ATCGATGAGG GCAAGTTTTC GATCATCCCG
ACGTCTACTG ACCTCCGGGT GCTCGGCAAG CAGATTATCG ACCTCATGCA GTTCAAAGCG
GACGAAAAGA AGCTCGAACT GCGGTTGGAA ATCGGCAAAG ATATTCCTGA TTGTGTGACC
GTGGACGGCA TGCGCCTGAA CCAGATCCTG CTCAATCTCG TAGGTAATGC ATTGAAATTC
ACAGGGACGG GCAATGTGAC GCTCAAAATG GAGCATCTGG CCCAAACGGC GGCCGGGCAC
ACGATCCGCT TTGCGGTGGA GGATACGGGC ATCGGAATGT CGGACGATCA CCTGGCCAAT
ATTTTCTCCG AATACGGGCA GGCTTCTGAA AATATCTCTC ACCAGTACGG CGGCACGGGC
CTCGGGCTGA CGATCTCGCA AAAGCTCGTG CGGCTCATGG GCAGTGAGCT AGAAGTAAAC
AGCCGTTTCC AGGAGGGCAG CCAGTTTTTC TTTACCCTCA TTCTCCAAGA CGCCAACGAA
AAGAGCGGTG ACGCGAAGCC GGTGGTTTCG TTCCAGAACC TCCCGCCGTT TGAAGGGAAA
AAAGTGCTCG TAGCCGAAGA CAACCCCATT AATGCATTGC TTTTGAAAAA ATACCTGAAA
GCGTGGCAAC TGAATGCGGT AATCGTAGGC AATGGCAAAG AAGCGGTGGA ACAGCTGCGA
GAGGAGCCGT TCGACCTCAT CATTATGGAC ACCCGCATGC CGGAAATGGA CGGCTTCCAG
GCCGCCCGCA TGGCGCGCGA GGAGTTGCAT GTAAAAACGC CCATATTGTC GCTCTCGGCG
ACTGTTTTGC CCGAAGAAGT GGCCCAGGCG CTTGAAGCCG GCATGAACGA TACGCTATCG
AAGCCGTTTG AGCCGGAGAA GTTGCACCAG AAAATAGATT TACTGCTTTC AACCTTAGCG
CCCGCAAACG TGTCCCAAAG GTGA
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| Protein sequence | MENTKILLLD DREENLISLK AILNRDDIEI YATTSPNEAL RMVWESDIAV ALVDVQMPGM
DGFEFAETLF SNPKTREILI VFVTAISKET TYAVRGLKTG AIDYLYKPLD PYITNAKVDS
LIKLARSQRE IRDKNKLLEN YATIVLNSPD IIATVEPDTG SILSINPSVE AILGISPQSL
IKTSVLDLLV DPLNSALREV LVKRSFVGGE TIVVEDQFYG RLRQPVWLEL RIMYKNRLLF
VNLHDVEKRK AHELALIDAQ AQAEKARKTK ESFLANMSHE IRTPLNGIIG LGNLLAATEL
SEAQAELVDM LRQSSGSLLN ILNDILDISK IDEGKFSIIP TSTDLRVLGK QIIDLMQFKA
DEKKLELRLE IGKDIPDCVT VDGMRLNQIL LNLVGNALKF TGTGNVTLKM EHLAQTAAGH
TIRFAVEDTG IGMSDDHLAN IFSEYGQASE NISHQYGGTG LGLTISQKLV RLMGSELEVN
SRFQEGSQFF FTLILQDANE KSGDAKPVVS FQNLPPFEGK KVLVAEDNPI NALLLKKYLK
AWQLNAVIVG NGKEAVEQLR EEPFDLIIMD TRMPEMDGFQ AARMAREELH VKTPILSLSA
TVLPEEVAQA LEAGMNDTLS KPFEPEKLHQ KIDLLLSTLA PANVSQR
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