Gene Dfer_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1117 
Symbol 
ID8224688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1332090 
End bp1333064 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content55% 
IMG OID644928979 
ProductMethyltransferase type 11 
Protein accessionYP_003085531 
Protein GI255034910 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.39297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.202643 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCGC TTTCCCCATT GCTTTCTGAA TACCTGCAAA ATAATACGCT CGTGTGCCCG 
GTGTGCCATT CCCGGCTGAC GGTCGCGACC GATCGCATTA TATGCTCCTC CGGCGACTGC
CGGCATTCAG CCGATCCTAT TCCGATGATC CAGGGCAAAA TCCCGGTTCT GGTGAACTTC
GAGGAAAGCA TTTTAAACAG GGAAGCGCTC ATAGCCACCG CCGGTGAAAG CCTTATTCCA
AGGAGCGGTA ATAAGTATGA CGCCATTAAG AGGATTTTCT GGGGCCGTGG CAAGAAGACG
AAGATTAACC TTCAAAAATT CCTCGCGGCC GTTCCCAAAT ATCCCGGCAA AAAATCGTCG
GTGCTGATCA TCGGAGGCGG GGCGATCGGA AACGGGGCCT CGGAAATGTA CAATGCGAAA
GACATCGACG TGCTTTCATT CGATATTTAC GCTTCTCCGA ATACCGATTT CGTCGCAGAC
GGCCATTCGC TGCCCGTGGC CGATAATAGC ATCGACGCCG TCTGGATCCA GGCGGTGCTG
GAACACGTGA TGTATCCGCC GCGGGTTGTG GCCGAAATCC ATCGGGTATT AAAACAAGGC
GGCGTCGTGT ACGCCGAAAC ACCATTCCAG CAGCATGTGC ACGAGGGTCC TTACGACTTC
ACGCGCTTCA CCGAAAGCGG GCACCGGCTG CTGTTCAAGG ACTTCCGCCT GCTCGATTCG
GGATTCCTTA CCGGCCTGGG CACGGTTCTG CAATGGAACG TGCGCTACGC CGCCTGGGGC
CTTACCCGAA GCAGAAAAGT GGCGATCGTT GTGGCCATGG CTTTCGCGTG GGTCCGGCTG
TTCGACCATC TTGTGCCGGA GTCGTTTAAC GTGGATACTG CCAGCGGCGT GTATTTTCTG
GGCCGCAAAG ATGCGGGCCA TCGATTCAGC GACAAGGACA TTATCGCTCA TTACAAAGGG
TTTCAGCGGA AATAA
 
Protein sequence
MNALSPLLSE YLQNNTLVCP VCHSRLTVAT DRIICSSGDC RHSADPIPMI QGKIPVLVNF 
EESILNREAL IATAGESLIP RSGNKYDAIK RIFWGRGKKT KINLQKFLAA VPKYPGKKSS
VLIIGGGAIG NGASEMYNAK DIDVLSFDIY ASPNTDFVAD GHSLPVADNS IDAVWIQAVL
EHVMYPPRVV AEIHRVLKQG GVVYAETPFQ QHVHEGPYDF TRFTESGHRL LFKDFRLLDS
GFLTGLGTVL QWNVRYAAWG LTRSRKVAIV VAMAFAWVRL FDHLVPESFN VDTASGVYFL
GRKDAGHRFS DKDIIAHYKG FQRK