Gene Dfer_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1074 
Symbol 
ID8224645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1272018 
End bp1272875 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content50% 
IMG OID644928936 
Producthypothetical protein 
Protein accessionYP_003085488 
Protein GI255034867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000709706 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.646556 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACT TTATCAGCCA ACTACTGGTT GCACTACTGG TAACTTTCCC GCTGCTTCAA 
TGCCAGCATG ACAGGCCTAC TCCTTCTCCC GGAGAAAGTC CGCAATCCGT TTCAATGGTT
ATTACCGCCA AAGATGCGGA AAGACTTGTT CTTGCCGGAC TTTCGGAAGC CACGAATGCT
ACTTCCAGAA CTTCTGCTGC AAATGCCGGT GCCTCCAAAC GAATCAAAAA CGTTCGTACT
TTGAACGACG ACGAGGGCAG TCCCTTAATG CACATCATTC ATTTTGAGTC GGATACAAGT
CCTGATGCAG GTTTTGTGAT CATTGCAGGT GATAGACGTG TCATCCCGAT TCTGGCAAAA
GGCGACAGCG GCACATTCGA ACCGGACGGC GAGAATCCCG GGCCCCGCAT CTGGATCGAG
CATGTAAAGG TTGAAGTGGC GGAGGGTAAA AAGCACGTCA ACGAGCCCGG CAAGGGTATC
GAATTAATGT GGCGGAAGCT GGAAGACGGA AATGCGTTGA CATGGGGAAA AAGGAATAGT
GAACCACCCA TTGACCCTAC TAACTGCCCG GCGGATACGT ATTACAGTAG CGGGCTGCTC
ATCACGTCGC AATGGATGTC AAAAAAGGCG TACAGCATGT ACTGTCCATC CAAAAGTTGC
GATGGTTGCC CTACGGCAAA TGCAGGTTGT GGCGCAGTTG CTATCGCCCA GGTTTGGAAT
GCCTCGTGCA ATCAAAAGCC CGCGACATAT TCAATTGCAC CGGGGCCGGT TACGAATTAC
AATTTCCCCT TAAACGATAA GATTTTACGA CTAACTGTTC ATCAGCGAAT CTTGCCGATC
AGCAGATTGC GAACATGA
 
Protein sequence
MKNFISQLLV ALLVTFPLLQ CQHDRPTPSP GESPQSVSMV ITAKDAERLV LAGLSEATNA 
TSRTSAANAG ASKRIKNVRT LNDDEGSPLM HIIHFESDTS PDAGFVIIAG DRRVIPILAK
GDSGTFEPDG ENPGPRIWIE HVKVEVAEGK KHVNEPGKGI ELMWRKLEDG NALTWGKRNS
EPPIDPTNCP ADTYYSSGLL ITSQWMSKKA YSMYCPSKSC DGCPTANAGC GAVAIAQVWN
ASCNQKPATY SIAPGPVTNY NFPLNDKILR LTVHQRILPI SRLRT