Gene Dfer_1068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1068 
Symbol 
ID8224639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1264346 
End bp1264840 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content51% 
IMG OID644928930 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_003085482 
Protein GI255034861 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2131] Deoxycytidylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.223544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTAC CTACAACGAA TTTGCGGCCG GAATTTGATG ACATTTATAT GGACCTGGCA 
AAAAATCTTG CCAAGCGTTC GCATTGTATA AAAGCGCAGG TGGGGGCGGT GCTAACGAAG
GACACGCGGA TTATTTCCAT CGGCTACAAT GGCCCTCCCG CGGGCACGCA CAACTGCGAC
GAAGAATTTC CGGGAGTAGG TTGTCCGCGT GATGCGAAAG GCAGTTGCTC ACTCGCGCTG
CACGCCGAGC AAAACGCCAT TCTTTTCGCC GTCAAAAACG GCTCAAACAT CGAAGGATCA
ACACTTTTTG TTACGCTGGC GCCTTGCATT GCCTGCGCAA GGGTGATTTA CACGATGAAA
ATCAAGAAAG TAATTTTCCT GCATTCCTAC GCCGCATACA AAGGCATAGC CGTGGAAGAG
GGCGTGGAGT TTTTGAGAAG ATTCGGGGTG GAGGTGGAGC AGTATCGGGC GTTGGAAGGG
CTGAATAATG ATTGA
 
Protein sequence
MTLPTTNLRP EFDDIYMDLA KNLAKRSHCI KAQVGAVLTK DTRIISIGYN GPPAGTHNCD 
EEFPGVGCPR DAKGSCSLAL HAEQNAILFA VKNGSNIEGS TLFVTLAPCI ACARVIYTMK
IKKVIFLHSY AAYKGIAVEE GVEFLRRFGV EVEQYRALEG LNND