| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1015 |
|---|
| Symbol | |
|---|
| ID | 8224585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 1194736 |
|---|
| End bp | 1195743 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644928876 |
|---|
| Product | 2-keto-3-deoxy-galactonokinase |
|---|
| Protein accession | YP_003085429 |
|---|
| Protein GI | 255034808 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3734] 2-keto-3-deoxy-galactonokinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.174536 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC ACCTGCTGAG CTGTGACTGG GGAACATCGT CGTTCCGGTT GAGGCTGGTT
AATGTGACGG ATCATGAAGT GGTAGGCGAG GTGACCACGC CGAGCGGAAT CGGGGCCGTG
TACAATGCCT GGAAAGAGGC CTGCGAAACG GAGCCTGTTT CCCGCAATGC CTATTACCGA
ACGGTTATTT CAACGCAGAT CACTGCACTG CAAGCGCAAA CGGGCATCGA CCCGACGGGC
GTCCCGATTG TACTTTCGGG CATGGCGTCG TCGTCCATCG GCATGGAAGA ACTGCCGTAT
GCACGGCTGC CGTTTGCATT GGAAGGCAGC CATTTGGTGG TGCACCAGGA TGAGGAATGG
CCGGCATTTC CGCACGCTAT CACGCTGATT TCGGGCGTGC GCGGCGACCA CGACGTCATG
CGCGGCGAAG AAACGCAACT GATCGGCCTC GCGGCGGCAA TGGACTTTTC GGCGCGCGAT
GCCGTATTCG TTTTTCCCGG CACGCACTCC AAGCATATGT ACGTGCGCGA CGGTGTTCTG
ATTGATTTCA AGACCTTTAT GACCGGTGAG GTGTTCAACC TGATGGCCAA CCAAAGCATT
CTGAAAGATT CGATAGACCA CTACCGCCAG CCGGATTTCA ACGCCGAGGC GGCCGACGCT
TTCCGTGAAG GCATACGCGA ATCGGGATCG GGGAATATTT TAAATGCATT ATTTACAGTA
AGAACCAACC AGCTTTTTGA TTTATTAAAC AAAAGGCAAA ACGGAATGTA CCTGAGCGGC
CTGCTGATCG GCTATGAGCT CCGCAGCCTT TTGAAAGAAA CGAATGCACA CCTGGTGCTT
TGCGGCGGCA ACAATTTGTA CCACCTTTAC AAAGCGGCGA TCGAGACGCT GGGCATGGCC
GGAAGGGCAA CCATCATCCC GTCGGAAATC GTCGACCGCG CAGCAACCAC CGGCCACATC
CGGATTTTTG AGAACCAACA TTTAACATTG AATAAAACAG ATTTATGA
|
|---|
| Protein sequence | MKKHLLSCDW GTSSFRLRLV NVTDHEVVGE VTTPSGIGAV YNAWKEACET EPVSRNAYYR
TVISTQITAL QAQTGIDPTG VPIVLSGMAS SSIGMEELPY ARLPFALEGS HLVVHQDEEW
PAFPHAITLI SGVRGDHDVM RGEETQLIGL AAAMDFSARD AVFVFPGTHS KHMYVRDGVL
IDFKTFMTGE VFNLMANQSI LKDSIDHYRQ PDFNAEAADA FREGIRESGS GNILNALFTV
RTNQLFDLLN KRQNGMYLSG LLIGYELRSL LKETNAHLVL CGGNNLYHLY KAAIETLGMA
GRATIIPSEI VDRAATTGHI RIFENQHLTL NKTDL
|
|---|
| |