| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1005 |
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| Symbol | |
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| ID | 8224575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1176194 |
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| End bp | 1177366 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644928866 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_003085419 |
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| Protein GI | 255034798 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000807756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.310499 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGAAC AATCCGGGCT GCCGCTCACG GTCGGGCAGT TCTGGTGGTA TTCCTTCTGC
TACTGGGGCA TTTTTGCCGT GATAACGTTT GGTCAGCTTA TGATGCTTTG GCTATTAAAG
ATGGGTGTGG CTATGCAACC GCACGAGATG TTCGTCTGGC TGCTCGACGG GCTGTTCTGG
TGGTCTACCA CCCCGCTCGT CCTGTACGCG TCCATCCGTG TGCCGGTGGC GTTCAAGGTG
CGCGACGGCT CGTCGATCAT CAAACCGATC CTGTTCCATT TGTGCATTGT CACGTTTCTG
AATATTTTCA TCAATGTCCT GCATTTCTAC ATCACCAATC CGCTGATGTA CCGCGCCGTG
GGCCGTATGG TACCGCTGGA AAACTACCTG TTTTCATTTT TCATTGCCTA CACGGCCAGT
TTCGGGCAGT ACCTGTTGCT GGTGGTGGGT TTCAACAAGG TATCCTACAT TTACCGCTAC
CAGCAGCTCA AACAGCAGCA TTTCGAAAGC GAGCTGCACA ACGAGCAGCT TCGCGGCCAG
CTGGCCAATG CGCAGTTGCA ATCGCTCAAA ATGCAGCTCA ACCCGCACTT TCTTTTCAAC
ACCTTACACA GCGTGGTGAG CCTCATGGTA AAAAACGACA TCCGCAAAGC CACGCTCATG
ATTACCACCC TCAGCGATTT GCTGCGTGCA GTGCTGGTGA ACCAGTCGGC CGATTTTATC
CCCTTGCAGG AAGAACTGAA ACTGACCCGG CAATACCTCG ACATCCAGCA GATCCGCTTT
CAGGACCGCC TGAAAGTGGA ATACCACATC GACCCGGCCT CGGAACTCTA CCCCGTGCCC
CAGCTGATCC TGCAACCGAT CGTCGAAAAC TCGATCACAC ACGGCATTTC GGACATGACC
ACCAACGCGC TCATCAGTAT CACGAGCCAT GTAAGTGCCG CGGGTATGCA GGTAACGGTG
TACGACAACG GCCTGGGTGC CGCCTCCCGT AAAACCACCA AAGGGATGGG CCTCGGCTTG
CAGAATACAT TGCTCAGGCT GCAACAGGCC TACGGCACAA AAGCCCGGCT CGAATTTCAG
CAGCCGGTTG GGGGCGGAAC GTCTGTGACG TTGCATTTTG AAGGTAGAAT CGAACAAGGT
GACAATGGAG GAAGCAGGAG TGGAAATATT TAA
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| Protein sequence | MLEQSGLPLT VGQFWWYSFC YWGIFAVITF GQLMMLWLLK MGVAMQPHEM FVWLLDGLFW
WSTTPLVLYA SIRVPVAFKV RDGSSIIKPI LFHLCIVTFL NIFINVLHFY ITNPLMYRAV
GRMVPLENYL FSFFIAYTAS FGQYLLLVVG FNKVSYIYRY QQLKQQHFES ELHNEQLRGQ
LANAQLQSLK MQLNPHFLFN TLHSVVSLMV KNDIRKATLM ITTLSDLLRA VLVNQSADFI
PLQEELKLTR QYLDIQQIRF QDRLKVEYHI DPASELYPVP QLILQPIVEN SITHGISDMT
TNALISITSH VSAAGMQVTV YDNGLGAASR KTTKGMGLGL QNTLLRLQQA YGTKARLEFQ
QPVGGGTSVT LHFEGRIEQG DNGGSRSGNI
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