| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0969 |
|---|
| Symbol | |
|---|
| ID | 8224538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 1125675 |
|---|
| End bp | 1126421 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644928829 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003085383 |
|---|
| Protein GI | 255034762 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.000295525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.000492086 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACCC AAGAGCAGAT ACTGAGAGAA CTGTCAGAAA TCAGGGAAGC TATTGTTAGA
ATCGCGGGTA CACCAGCACT TCCGCCAGAA GAGCAATTCT CTGAAGCCTC ACTGGATAAA
GTTGCCCTGG AATTAAAGAA GCTTTCCATC AAAAGAGGTG AATGGATCGA TGACAGGGAT
CTGAGCAGAT ATTTCAAAGG GGTCTACAAT GGGGGAAGGT TCATCCGGGA AACGTTCGGA
TTTAATGATT TTTTCAAGAA GGGAAAATCA TATTATTACC GGAAATCCAG CATTATCCGT
TTATCCCAGG AATTGAAATC CCGAAATGTT GACTTGGCCC GATACATGGA GCTTAAAGAG
AGTGAGGCAA AATTCCAGGA AAAAGTCTCC GCGGTCGCTG CCGCAAACAA AAAGCAAAAA
AAGAAACCCC CATTTCAGTT ACCTGATTCC CTAAAAGACA TTACTACCGA AGACTTTCAT
CCAGCAGTTG AAATTGTTGA AGCCGAACTG AGCAAGCTGC GTGAGCAGTT TACCAAAGAA
AATCTTTCAA AATATATAGA TGTTTACGGT GGTCATGCCA TGATGAAATT CCGCTATCCA
TTTTCAGGGT TTGCCGAAAA GGAGATAAAA TCCAAATGCA GGCGCTGGTG CGACCAATAC
AACATGGCCT GCGATGCACT TTCGAAGTTG AGTGGAAAAG AGAAGAAATT TACCCCACCG
GAAGACCCTA ATGCCTATGA ATTATGA
|
|---|
| Protein sequence | MKTQEQILRE LSEIREAIVR IAGTPALPPE EQFSEASLDK VALELKKLSI KRGEWIDDRD
LSRYFKGVYN GGRFIRETFG FNDFFKKGKS YYYRKSSIIR LSQELKSRNV DLARYMELKE
SEAKFQEKVS AVAAANKKQK KKPPFQLPDS LKDITTEDFH PAVEIVEAEL SKLREQFTKE
NLSKYIDVYG GHAMMKFRYP FSGFAEKEIK SKCRRWCDQY NMACDALSKL SGKEKKFTPP
EDPNAYEL
|
|---|
| |