Gene Dfer_0968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0968 
Symbol 
ID8224537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1124557 
End bp1125468 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content46% 
IMG OID644928828 
Producthypothetical protein 
Protein accessionYP_003085382 
Protein GI255034761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00821415 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00017885 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATGATGA GATATATTTC AGAAGATGTC AAGGATCTGA AACCGGTCTG GATATCAAGT 
CAGGAGACCG AGCACCCGGA GAAAATATTC CCGGAGTTTT GGAGAAATTA TACGATTGCT
GATTGCAGGT TCTTTTTGTG GCAGATGCTC TCAGCATCGA TATCGACGGA AGGCCAGCAC
GTAGATGCCA GCCCTGGAGA GCAACTCTAT TTTTTTGAGA ATCTAGTGGT ATACCTTGAA
GCATCGTTTG TGTTGGATCA TCATCGGTCT TTGTCAAAAG CAAAAGGAGA TGAACGCGAG
CGTACTGAGC CTAGAACACC TTCCGGGAAG TCGGACTCAG AAACAAATCG AGGAGGCCTA
CCGAAGAAGC TCAATAAGCG GCTTAAAAGG CTATCTATCT GGCACCGTGA TGGATTCGAT
GACCCGTACG CGATTCTTGA TTCCTTTTTT GACGCGTACG ACCTAACAAC CTTTAAGGCG
AGATTGTACG ATATTTTGCA GGTGTGCTGT CAAGAAAAAT ATTACGACAA GGGCTGCCCA
GCGGATGTGC TCTATCTACT AGAAAAGGTT GAATCGATCA TCAATGCTGC CTACCTGATC
CTGGGCGGGG AGAACGAAAA ACGGCTAACC AAGTCGAAAC CATCCGCCGA AGTCACGTGC
AAAGCTGGCG TCAGACCGCA AGGAGAAATT GAACTACCTG CCGGTACTAT TCAATTCTTG
ACAGAATTTT TTGAGTATAA GGGCTTAAAG AAGTGGAAAC AGGAACTTAA CCGGATTTGC
CTTTACTCCC TAAGTAGCCA GTCTGCTCAG GAGTGGGGTG TTTACATTGA CTTGCTTACC
TTATACCAGC TAGTTGGTAG ACTAGCCGAA ACGGCTTTTG ATCTTCGAAA AAATAGATCG
GCGTTGGTGT AA
 
Protein sequence
MMMRYISEDV KDLKPVWISS QETEHPEKIF PEFWRNYTIA DCRFFLWQML SASISTEGQH 
VDASPGEQLY FFENLVVYLE ASFVLDHHRS LSKAKGDERE RTEPRTPSGK SDSETNRGGL
PKKLNKRLKR LSIWHRDGFD DPYAILDSFF DAYDLTTFKA RLYDILQVCC QEKYYDKGCP
ADVLYLLEKV ESIINAAYLI LGGENEKRLT KSKPSAEVTC KAGVRPQGEI ELPAGTIQFL
TEFFEYKGLK KWKQELNRIC LYSLSSQSAQ EWGVYIDLLT LYQLVGRLAE TAFDLRKNRS
ALV