Gene Dfer_0913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0913 
Symbol 
ID8224482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1071472 
End bp1072257 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content49% 
IMG OID644928777 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_003085331 
Protein GI255034710 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.515839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.110771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAG CGACCTACAA TATCAACGGC GTTAACGGGC GCTTACCGGT TCTGTTAAAA 
TGGCTCGAAG AAGCTAAGCC CGACGTTGTG TGCTTGCAAG AATTGAAAGC GCCGCAAGAC
AAGTTTCCGG AGCGGGCGCT GTTGGACGCA GGATACAATT CCATTTGGCA TGGGCAAAAA
ATGTGGAACG GGGTTGCGAT ACTTTCAAAG GATCTACCAA TTCAAGAAGT CCGAAACTCA
CTTCCGGGCG ATGACAGTGA TTTGCATAGC CGGTACATTG AAGCTATCGT CGGCAGGATG
CTTGTATGTT GCCTTTATTT GCCAAACGGA AACCCTGCGC CAGGGCCCAA GTTTGATTAT
AAAATGGCGT GGTTCAAGCG GTTGAAGAAG CACGCGAAGT ATCTGTTGTC GGAAGAAGTG
CCGGTTGTAC TGGCAGGTGA TTATAATGTC ATCCCAAAAG AAAAGGATGT TTACAAACCT
GAGCGATGGG TAGATAATGC ATTGTTTTTC CCGGAGCCTC GCAAAGCGTA CAAAGAACTG
GTCGGCCAGG GCTGGATCGA TTCAATCAGG CATCTGCATC CCGACGAAAC GATTTATACT
TTCTGGGACT ATCTTAGAAA TGCGTACGGA CGAAATGCCG GTCTCCGCTT AGATCATTTA
CTTTTGAGTC CGCAAATTGC TCCGCGTCTG GTCGCAGCAG GCGTGGACAA GCACGTCCGG
GGTTGGGAGA AGTCCAGCGA CCATGCACCT ACATGGATTA TTTTAGCGGA TGAAGAAGAA
ATGTAG
 
Protein sequence
MKIATYNING VNGRLPVLLK WLEEAKPDVV CLQELKAPQD KFPERALLDA GYNSIWHGQK 
MWNGVAILSK DLPIQEVRNS LPGDDSDLHS RYIEAIVGRM LVCCLYLPNG NPAPGPKFDY
KMAWFKRLKK HAKYLLSEEV PVVLAGDYNV IPKEKDVYKP ERWVDNALFF PEPRKAYKEL
VGQGWIDSIR HLHPDETIYT FWDYLRNAYG RNAGLRLDHL LLSPQIAPRL VAAGVDKHVR
GWEKSSDHAP TWIILADEEE M