Gene Dfer_0904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0904 
Symbol 
ID8224473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1064771 
End bp1065511 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content52% 
IMG OID644928768 
ProductNmrA family protein 
Protein accessionYP_003085322 
Protein GI255034701 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.705633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.268772 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG TAGTGATTGG CGGTACCGGG TTAATCGGAT CAAATGTCAG CGAGAAACTA 
AGGCTACTGG GCCATCAGGT AATCATCGCT TCTCCTTCGA CAGGTATCAA TGCATTGACT
GGTGAAGGTC TTGCTGATGC CATGGTGGGC GCTGAGGTGG TGATTGATCT TTCCAACTCG
GCTTCTCCCG AAGAAGATAC CGCGATCCAT TTTTTCCGGA CGACGGGTAA AAACCTGATT
GCGGCCGAAA CGGCGGCTGG CGTTAAACAC CACTTGGTAC TTTCGATCGT AGGAACCGAC
CGGGCTTTGT ACATCGGCTA TCTGCGCGCC AAAAAAGAGC AGGAAGACAT GGTCAAAGCA
TCCGGTATCC CCTACACGAT CATCCGGGCG ACGCAGTTCC ACGAACACAT CACGACCTTG
ATCGCTGTGC AATCCGACGA GGAGGCCATT CACATTTCAA CTGTTGACTA CCAGCCCATT
GCTGCGGAGG ATGTCGCTGC ATTGGTCACG CAGCTCGCAT TGGAACCGCC CAAAAATACG
ACGGTAGAAA TTGCCGGGCC TGACCTGGCG CCCATGACCG AGTTCGTCAG CGAGTACCTT
TCTCTCAAAG GCATAGATAA ACCCTTAAAG GCCAACGACG AAAACAAATA CATGTTCTTT
GACATCCCCA AATCCCTGTT GGTCCCCCAG GGCGAGTTTT ATCGTGGCGC AATCCGGTTC
AGCGACTGGA TTAGCGAATA G
 
Protein sequence
MKIVVIGGTG LIGSNVSEKL RLLGHQVIIA SPSTGINALT GEGLADAMVG AEVVIDLSNS 
ASPEEDTAIH FFRTTGKNLI AAETAAGVKH HLVLSIVGTD RALYIGYLRA KKEQEDMVKA
SGIPYTIIRA TQFHEHITTL IAVQSDEEAI HISTVDYQPI AAEDVAALVT QLALEPPKNT
TVEIAGPDLA PMTEFVSEYL SLKGIDKPLK ANDENKYMFF DIPKSLLVPQ GEFYRGAIRF
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