Gene Dfer_0732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0732 
Symbol 
ID8224301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp873522 
End bp875774 
Gene Length2253 bp 
Protein Length750 aa 
Translation table11 
GC content58% 
IMG OID644928604 
Productaldehyde oxidase and xanthine dehydrogenase molybdopterin binding 
Protein accessionYP_003085158 
Protein GI255034537 
COG category[C] Energy production and conversion 
COG ID[COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATG ATAAAAACGC ATTGAACCGG CGCTCGTTTC TGAAAGCGTC GCTGCTCTCG 
GGCGGGGGAA TGATGCTGAC GGTGAATTTT CTGTCGGCTT TCAAATCGGC CGGAAAGGTC
GGCGCAGACC AGCCGGCGGA TCAATGGACC GAGCTTACGG GCTATATCCA GATTACGCCG
GACAACCGGA TCAAGCTCAT TTGTCCCAAC CCCGAATTCG GCCAGAATGT GATGACTTCG
CTGCCGATGA TCGTGGCCGA AGAACTGGAT GCCGACTGGA AGAATGTGAC CGTTGAAATG
GGTCCGCACG ATAATGTGAA GCTTGGGCCG CAGTTTTCGG GAGGCAGCAA TTCCGTGAGA
ATGTACTGGA AACCGCTGCG GGAAGCCGGT GCGGCGGCCC GCCAAATGCT GCGCGAGGCA
GCGGCGCAAG CCTGGAACGT GCCGGTGGGA GAGGTGACCA CCCGGGCCGG TATGCTTGCC
CATTCCAGTG GGAAAACGGC CCCCTACGGC GCCATGGCCG CCAAAGCCGC CACGCGGCCG
ATCCCCAAAG AACTGACCCT TAAATCGCCG AAAGATTTCA CGATCGTACG CCAATCCAAA
AAGAATGTGG AAGGGCAAAA GCTGGTCACC GGAAAGCCGC TGTTCGGGCT GGATTACCGC
GTGGAGGGTA TGCTGATCGC GATGATCCAC CACCCGCCCG CATTTGGTAT GAAACTGAAA
TCCTTTGATT CCGCCGAGGC GCTGAAAATG CCGGGCATTA AAGATGTTTT CAGCCTCAAA
TTGTACGAGG AGGGATTTGA ACAGGCTGGT TTCGATACGC GCACATTCAA CGACCTGCTT
GTGATTGTGG GCAAAACCAC GTGGGAAGTG ATGAATGCAC GCAAAAAACT CGTTGCGCAC
TGGGAGCCGG CGGGCGAGAC CAGGAATGTG CTCTCGGGAA GGAACGGGAA ACGTGAAGTG
ACCGTGCCAG GCGCGCTGGA AAGCTCCGAA ACCCAGCGGC AGCAAATGCT GGAATATGCC
AAAAAGCCGG CCAAAGAACT GCGGCGTGAC GGTGATCCCG AAACCGCTTT CAAAAGCGCG
GCGCAGGTGA TCGAACGAAC CTACACCGCG CCGTTCCTCG CGCACAACTG CATGGAGCCG
ATGAATTATT TCGCCCATGT TACCGACGAG AAAGCGATCC TGGTGGGGCC GCTGCAATCG
CCGGGATGGA TAGAGCCGAC CATCAGCAAG CTGCTGAACC TGCCTCCCGA AAAAATTGAA
ATACACATGA CCCGCATGGG CGGAGGCTTC GGTCGGAGGG CCTACAATCA TTATTTGTCC
GAAGCGGCAT TGATTTCCAG AAAAGTCAAA GCGCCGGTGA AGCTGATTTA CACCCGCGAG
GACGACATGA CCTACGGCAT TTACCGGCCC ATGTACACGG CTACTTACCG CGCCGCGCTC
GACGCCAACA AAAAGCTCAT CGCTTTTCAC GTTAAAGGCG GCGGTATCCC CGAGCATCCC
ATTCATCCCA ACCGCTTCCC GGCGGGCGCG GTGGATAATT ACCTGTCGGA GGGCTGGCAG
ATTGCCTCCA ACGTAACCAT CGGTGCATTC CGCGCGCCGG GCTCTAATTT CAATGCAGCA
GCCGAGCAGT CTTTCCTGGA TGAGCTGGCG GAGGCGATGG GCCAGGACCC GATCCAGTTC
AGGCTGGATC TGCTGAAAAG GGCGAAGGAA AACCCGGTGG GACAGAACAA CGACTACGAC
CCCGACCGCT ATGCCGGCGT GCTGGAACTC GTTCGCGACA AGGCGGGGTG GGGCAAGTCC
GGAAGCGAAA AATACAGCCG CGGTGTAGCC GCCTATTTCT GCCACAATTC CTACGCCGCG
CACATCGTGG ACATGGTCAC GCGCGAGGGC CAGCCTTACG TCGAGCGGGT TTTCAGCGCG
ATGGACTGCG GGATCGTGGT AAATCCCGAC GCCGCCACGA ATATGGTGCA GGGCGCGGTG
GTGGATGGCA TCGGCAATGC GTTTTACGGT GCGCTCACCC ACAAAGATGG CGCTCCCCAG
CAAACCAATT TCGATAACTA CCGGATCATC CGCCACAACG AGGCCCCGAA AAAAATCGAG
GTGCATTTCG TGCAAAACGA CAAGGACCCG ACAGGCCTGG GCGAGCCGCC GTTCCCGCCG
GTGTTTGGCG CGGTTGCCAA TGCGCTCTAC AAAAACAAGG GACGGAGGTT TTACAACCAA
CCATTCAAGC CCGAGCTCGA TAAAGTCATT TAA
 
Protein sequence
MNDDKNALNR RSFLKASLLS GGGMMLTVNF LSAFKSAGKV GADQPADQWT ELTGYIQITP 
DNRIKLICPN PEFGQNVMTS LPMIVAEELD ADWKNVTVEM GPHDNVKLGP QFSGGSNSVR
MYWKPLREAG AAARQMLREA AAQAWNVPVG EVTTRAGMLA HSSGKTAPYG AMAAKAATRP
IPKELTLKSP KDFTIVRQSK KNVEGQKLVT GKPLFGLDYR VEGMLIAMIH HPPAFGMKLK
SFDSAEALKM PGIKDVFSLK LYEEGFEQAG FDTRTFNDLL VIVGKTTWEV MNARKKLVAH
WEPAGETRNV LSGRNGKREV TVPGALESSE TQRQQMLEYA KKPAKELRRD GDPETAFKSA
AQVIERTYTA PFLAHNCMEP MNYFAHVTDE KAILVGPLQS PGWIEPTISK LLNLPPEKIE
IHMTRMGGGF GRRAYNHYLS EAALISRKVK APVKLIYTRE DDMTYGIYRP MYTATYRAAL
DANKKLIAFH VKGGGIPEHP IHPNRFPAGA VDNYLSEGWQ IASNVTIGAF RAPGSNFNAA
AEQSFLDELA EAMGQDPIQF RLDLLKRAKE NPVGQNNDYD PDRYAGVLEL VRDKAGWGKS
GSEKYSRGVA AYFCHNSYAA HIVDMVTREG QPYVERVFSA MDCGIVVNPD AATNMVQGAV
VDGIGNAFYG ALTHKDGAPQ QTNFDNYRII RHNEAPKKIE VHFVQNDKDP TGLGEPPFPP
VFGAVANALY KNKGRRFYNQ PFKPELDKVI