| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0710 |
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| Symbol | |
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| ID | 8224279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 835190 |
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| End bp | 836617 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644928583 |
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| Product | outer membrane protein-like protein |
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| Protein accession | YP_003085137 |
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| Protein GI | 255034516 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000105718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.231109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCGC CTATGAAAAC AATAGCAATT CAGCTGGGCT TGCTCCTCGT AACGGCGCTT
TTCAATGTGT CTTTCGCCCA GGATTCGACC CGCACGCTAA GTGGCGAGCA GGTGTTGGAA
ATCGTGAGAA AATACCACCC GGTGGCCAGG CAGGCGCGCA TTCATGTGGA TAAGGCGCAG
GCCGACCTCC TCATCGCCCG CGGCGGGTTC GATCCCGTGC TGGGCGCTTA TGTAGCGCGC
AAGCGGTTCG GCGGGGTTGA TTACTACAAC CGCACTTCTC CCGAGATTAC CATCCCCACC
TGGTACGGCA TCGAAGTGCA CACCGGTATC GACAACTACA CAGGCGAGCG GCTGGACCCG
ACGATGTCCA AAGGGCAGTC GTCCTTCATC GGCGCGAGCA TTCCGCTGGC AAAAGACCTT
TTGATGGACA AGCGCCGCGC CTACCTGAAA CAGGCCCGGA TATTCACCTC CATGGCTGAA
ACGGAGCAGC AATTGTTTGT CAACGACCTG CTGATGGATG CGATGGATGC CTACTGGGGC
TGGGTGAGCA GCTATAACCT GTACCAGGTA ATGCGAACCG CGGTGGCGAT CAATGTCGAA
AGGCTGGACC TCGTGCGCAG GGCATTCAAT AATGGTGAGC GCGCGGCCAT CGATACCGTG
GAAGCGCTGG CGCAATTGCA AAGCTTTCAG TACCAGGAAG CGCAGTACAG GATACAATTC
ACTAACGCCG GACTGACGCT CTCCGGCTTT CTCTGGACCG ACTCCGGCTC GCCGTACAAC
CTGCCCGAAA ACATCGTCCC GCCGACCGCC TGGGACGACC AGCGGCTACT CGCAACAATG
GAGCTCGACC TGAATGCCCT GCTTACCATC GCGGAGAATT CACATCCCGC ATTGCGCGTG
TACGATTTCA AACTGCGGGC ATTGGATATT GACAAAAAGC TGAAATTCCA GGAACTGCTG
CCCAAAGCCG ACTTTCGCTA CAATCACCTC AGTAAGGGGT ATAATGCGTT TTCCAATATC
TCGGAATCGG CTTTTCTGGG GAATAACTAC CAGTATGGTT TCAAATTCGA GATACCGCTG
CGGCTTTCCG CGGGGCGGGG CGCATACAAA ATGGCGGGGC TGAAAATCAT GGAAACGCGC
CTCGACCAGG TTCAGAAACA GCTGGACCTG CAATTGAAGA TCAGGAAATA CCACAATGAG
TTTTCGGTCC TGAAAGAGCA GATAGGCCTC CAAACGCTCA ATTATGGCAA CTATCAAAGG
CTGCTGGAAG CCGAACAAAC GCTGTTTGGC AACGGGGAAA GCTCTTTGTT CCTCATCAAT
AGCCGCGAAA ACAAAGTGCT CGAAGCGCAG CAAAAGCTCA TTGAACTGAA AGCCAAATTC
TTCAAAACGG CCTTCGCCGT ACAATGGACG GCCGGTTTGC TCAACTAA
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| Protein sequence | MRPPMKTIAI QLGLLLVTAL FNVSFAQDST RTLSGEQVLE IVRKYHPVAR QARIHVDKAQ
ADLLIARGGF DPVLGAYVAR KRFGGVDYYN RTSPEITIPT WYGIEVHTGI DNYTGERLDP
TMSKGQSSFI GASIPLAKDL LMDKRRAYLK QARIFTSMAE TEQQLFVNDL LMDAMDAYWG
WVSSYNLYQV MRTAVAINVE RLDLVRRAFN NGERAAIDTV EALAQLQSFQ YQEAQYRIQF
TNAGLTLSGF LWTDSGSPYN LPENIVPPTA WDDQRLLATM ELDLNALLTI AENSHPALRV
YDFKLRALDI DKKLKFQELL PKADFRYNHL SKGYNAFSNI SESAFLGNNY QYGFKFEIPL
RLSAGRGAYK MAGLKIMETR LDQVQKQLDL QLKIRKYHNE FSVLKEQIGL QTLNYGNYQR
LLEAEQTLFG NGESSLFLIN SRENKVLEAQ QKLIELKAKF FKTAFAVQWT AGLLN
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