Gene Dfer_0635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0635 
Symbol 
ID8224204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp731762 
End bp733732 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content58% 
IMG OID644928509 
Productprotein of unknown function DUF1680 
Protein accessionYP_003085063 
Protein GI255034442 
COG category[S] Function unknown 
COG ID[COG3533] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.248482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTTAA GCACCAAAAT TTACCTGACC TCGGCTGTCC TCTGCAGTCT GCACGCTGCG 
CCATTTCAGG CCAGAGCCCA GCGCATTCAG CCTGTCCGGT TTTCGGAAGT CAATATTACC
GATCAGTTCT GGAAGCCCAA GCAGGAAAAG GTGGCGACGG CCACGCTGAA TGCGTGTATC
ATTCAAACCG AAGAAAAATC GGGGCGCATC CGGAACTTCG AAAAAGCAGC CCGCAAGCAG
GGCGAGAAGC ACGAGGGCAT TTACTACGAC GACAGCGACG TGTACAAGGC CATCGAAGCC
ATGGCCTATT CGCTCAAAAA CCGGCCCGAT GCCGCATTGG AACGAAAAGC CGACGAATGG
ATCGACAAGA TAGCCGCCGC CCAGCTCCCC GACGGCTATT TGAACACCTA CTACACCCTC
ACCGACCTCC AACAGCGCTG GACCGACATG GAGCGCCACG AGGATTACTG CGCAGGGCAT
TTGATGGAAG CCGCGGTAGC CTATTACAAT ACGACCGGCA AACGCAAGCT GCTCGACGTG
GCCATTCGCT TCGCCGACCA TATCGACGCC ACTTTCCGCG TGGCCAACCG GCCGTGGGTA
TCGGGCCACC AGGAAATAGA GCTGGCACTG ATGAAACTGT ATCACCTCAC GCACGAGGAC
CGTTACCTGA AACTCGCCGA CTGGTTTTTG GAACAACGCG GCCGCGGATA TGGAAAGGGC
AAAATCTGGG ATGAATGGAA AGACCCGAAA TACTGCCAGG ACGACGTGCC CGTAAAGCAG
CAAAAGGAAA TCACCGGCCA TGCCGTGCGC GCCATGTACC AGTACACGGG CGCGGCCGAC
GTGGCATCGG TAACCGGCGA CCCTGGCTAT ATGAATGCCA TGACCGCCGT GTGGGAAGAT
GTGGTGTACC GGAATATGTA CCTGACGGGC GGAATAGGCT CTTCGGGCCA CAACGAGGGC
TTCACCGACG ACTACGACCT GCCCAATGGC GCCGCGTACA GCGAAACATG CGCATCGGTA
GGGATGGTAT TCTGGAACCA GCGCATGAAC GCGCTCACCG GCGACGCCAA GTACATTGAC
GTGCTCGAAC GCAGCTTGTA CAATGGTGCG CTCGACGGCC TCAGCCTCAC CGGCGACCGC
TTTTTCTACG GCAACCCGCT TTCCTCTATC GGCAACAATG CCCGCAGCGC ATGGTTCGGC
ACGGCTTGCT GCCCTTCCAA CATTGCCCGG CTGGTGGCGT CCGTGGGCGA TTACATTTAC
GGCAAGGCTG ATGGGAAGAT CTGGGTGAAC CTTTTCGTGG GGAGCAACAC CACGTTCCAG
GTCGGAAAAA CGGCAGTGCC GCTGCAAATG AGCACGGATT ACCCGTGGAA TGGCAGCATC
AGAATTAAGG TAACACCGCC GCAGAAGGTG AAATATGCAT TGAATGTCCG CATTCCGGGC
TGGGCTGCCG GCACGCCCGT TCCCGGCGGC CTGTACAATT TCGCGGCCGC TGGCAACGGC
CGTGTTGAAG TGTTGCTTAA TGGCAAATCG GTTAACTATC AGAGCGACAA AGGCTACGCC
GTAATCGACC GGACCTGGCA GAACGGCGAC GAAATCGAGG TGCGGCTGCC GATGGACGTG
CGGCAGGTGA AAGCCCGCGC CGAAGTGAAG GCGGACGAAG GCCGCATTGC CATCCAGCGC
GGGCCCATTG TGTACTGCGT GGAAGGCGCC GACAATGCCG GCGAGGTATG GAACCTGCTC
GTGCCTGCAA ACGCTGCGTA CACCATTCAG AAAAGCAACC TGCTCGACGA GCCGATTGTG
GCTATTCAGG CTGGCCTGCA AGTCGTAAAA GCAGCACCCG ACGGCCTGAA CATCCGCACG
GAACCGCAAA CGGTGACCGC TATTCCCTAC TACACCTGGG CGAACCGCGG CCGCGGGCCG
ATGCAGGTGT GGCTGCCGGT GAAGATTAAG AATATCAGGT TAGCGGAATA G
 
Protein sequence
MHLSTKIYLT SAVLCSLHAA PFQARAQRIQ PVRFSEVNIT DQFWKPKQEK VATATLNACI 
IQTEEKSGRI RNFEKAARKQ GEKHEGIYYD DSDVYKAIEA MAYSLKNRPD AALERKADEW
IDKIAAAQLP DGYLNTYYTL TDLQQRWTDM ERHEDYCAGH LMEAAVAYYN TTGKRKLLDV
AIRFADHIDA TFRVANRPWV SGHQEIELAL MKLYHLTHED RYLKLADWFL EQRGRGYGKG
KIWDEWKDPK YCQDDVPVKQ QKEITGHAVR AMYQYTGAAD VASVTGDPGY MNAMTAVWED
VVYRNMYLTG GIGSSGHNEG FTDDYDLPNG AAYSETCASV GMVFWNQRMN ALTGDAKYID
VLERSLYNGA LDGLSLTGDR FFYGNPLSSI GNNARSAWFG TACCPSNIAR LVASVGDYIY
GKADGKIWVN LFVGSNTTFQ VGKTAVPLQM STDYPWNGSI RIKVTPPQKV KYALNVRIPG
WAAGTPVPGG LYNFAAAGNG RVEVLLNGKS VNYQSDKGYA VIDRTWQNGD EIEVRLPMDV
RQVKARAEVK ADEGRIAIQR GPIVYCVEGA DNAGEVWNLL VPANAAYTIQ KSNLLDEPIV
AIQAGLQVVK AAPDGLNIRT EPQTVTAIPY YTWANRGRGP MQVWLPVKIK NIRLAE