Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0586 |
Symbol | |
ID | 8224155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 666340 |
End bp | 667488 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644928461 |
Product | Mandelate racemase/muconate lactonizing protein |
Protein accession | YP_003085015 |
Protein GI | 255034394 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00367627 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAAATCA GAAGTTACGA GCTGTTCCAG GTGCCGCCCA GATGGTTGTT TTTGAAAATT GAAACGGACG AAGGCATTGT CGGCTGGGGC GAGCCGGTGA TTGAGGGTAA GGCCGCCACC GTGGCCGCCG CCGTGCATGA GCTCATGGAA GCGCTGATCG GCAAAGACCC GCTGGACATT GAAGGACATT GGAACACCAT GTACCGGGGC GGCTTCTACC GCGGCGGCCC GATCCTGATG AGCGCCATCG CGGGCATCGA CCAGGCATTG TGGGATATTA AAGGCAAATT CTTCAATGCG CCTGTTTACC AGCTGCTTGG CGGCAAATGC CGGGATAAAA TCAAGGTATA CTCCTGGATC GGCGGCGACC GGCCCGACGA AGTTGCCGGT GCTGCGACCG AATGCTTCGA CCGCGGTTTC AAGGCCATTA AAATGAATGC GACCAATGAA ATGCAGTACA TTGATTCTTT CGAAAAGATC GATCTGGCTA TCAAACGGGT TGCGTCGATC CGCGAGGCAT TAGGCTACAA AATCGAAATC GGCGTGGATT TCCACGGCAG GCTGCATAAG CCCATGGCCA AGGTGCTGGC GAAAGAGCTG GAACCGTTCC GCCCGATGTT TATCGAGGAG CCCGTGCTGG CTGAAAACAA CGAGGCATTG CGTGAAATCG CCGCGCATAC TTCCATCCCC ATTGCCACAG GCGAGCGGAT GTTCAGCCGC TGGGATTTCA AAAACCTGCT CATGGACGGC TACGTCGACA TTATCCAGCC CGACCTCTCC CACGCCGGGG GCATTACCGA ATGCAAAAAA ATCCTGTCCA TGGCCGAGGC ATTCGACGTG GCCGCAGCAC CGCATTGCCC GCTGGGCCCC ATCGCATTGG CAGCATGCTT GCAGGTAGAC GCCACCTCCC ACAACGCATT TATCCAGGAA CAAAGCCTGG GCATCCACTA CAACCAGGGC AGCGACCTGA TGGACTACCT CACTGACCGA ACGGTATTCG ACTACCACGA CGGCTTCGTC AACATCCCAT CCGGTCCCGG CCTGGGCATC GAGGTGGATG AAGAACAGGT ACGAAAAATG GCAGCCATCG GCCATAACTG GAAAAACCCG CTATGGTCCC ACGACGACGG CAGCGCAGCG GAATGGTAG
|
Protein sequence | MKIRSYELFQ VPPRWLFLKI ETDEGIVGWG EPVIEGKAAT VAAAVHELME ALIGKDPLDI EGHWNTMYRG GFYRGGPILM SAIAGIDQAL WDIKGKFFNA PVYQLLGGKC RDKIKVYSWI GGDRPDEVAG AATECFDRGF KAIKMNATNE MQYIDSFEKI DLAIKRVASI REALGYKIEI GVDFHGRLHK PMAKVLAKEL EPFRPMFIEE PVLAENNEAL REIAAHTSIP IATGERMFSR WDFKNLLMDG YVDIIQPDLS HAGGITECKK ILSMAEAFDV AAAPHCPLGP IALAACLQVD ATSHNAFIQE QSLGIHYNQG SDLMDYLTDR TVFDYHDGFV NIPSGPGLGI EVDEEQVRKM AAIGHNWKNP LWSHDDGSAA EW
|
| |