Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0581 |
Symbol | |
ID | 8224150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 661635 |
End bp | 662345 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644928457 |
Product | putative lipoprotein |
Protein accession | YP_003085011 |
Protein GI | 255034390 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0000922663 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00932499 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAAAAGT TAGTGTTAAT GCTCGGACTC CCGTTCCTGT TTCTTTCGTG CACCGACGAC GATAATCCCG GAGTGGTGAT GCCGCCCAAG TTGGAATTGA ACGACCAGTT CGACAGCGAC AAGAAAGGAT GGACAGCCGG TTTTGCCGAC TATCCCGTGA AAATGGAATC GGACTGGAAG CTCGAAGAAG GAATCGCAAG TTTGCCGGCT CCGCTCGACA CGAAGAAAAA GGGTTTCCGC ATTTCGGGTA ACAACCACAG CGACGACCTG TTTATGTATT TCAAAAAGAA AATGACAGGG CTGAAACCGA ACCAGGAATA TACGGCTGCA TTCACGCTGG AATTTGCGTC CGACGCGCCT TCGGAAGGCT GGGCGGGCGC TGGCGGCGCG CCGAATGCGG TTAGCGTGGG CATTGGTGCA GTAGGTGTAG AGCCCAAAAC GACCGTCGAT AGCCAGGAAC ATTACCGCAT GAACATCGAC AAAATCCAGC AGAAAAGTGA TGGCAAGGAC ATGAAGGTGA TTGGCGACAT TGGCAACGGA ACCGACAAAT TCGGCTACAA ACTGCTCACC AAAACAGGCG AATTCAAAGG CAAAACCGAC GCTAGCGGCA ACCTGTGGCT GATTTTCGGA ACCGACTCCG GCTTTGAGGC AACCACGACA TTGTATTACA CGTCCGTAAA AGTGAAACTT ACCGAAGCAG CAGCGAAATA A
|
Protein sequence | MKKLVLMLGL PFLFLSCTDD DNPGVVMPPK LELNDQFDSD KKGWTAGFAD YPVKMESDWK LEEGIASLPA PLDTKKKGFR ISGNNHSDDL FMYFKKKMTG LKPNQEYTAA FTLEFASDAP SEGWAGAGGA PNAVSVGIGA VGVEPKTTVD SQEHYRMNID KIQQKSDGKD MKVIGDIGNG TDKFGYKLLT KTGEFKGKTD ASGNLWLIFG TDSGFEATTT LYYTSVKVKL TEAAAK
|
| |