Gene Dfer_0581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0581 
Symbol 
ID8224150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp661635 
End bp662345 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content51% 
IMG OID644928457 
Productputative lipoprotein 
Protein accessionYP_003085011 
Protein GI255034390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0000922663 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00932499 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAGT TAGTGTTAAT GCTCGGACTC CCGTTCCTGT TTCTTTCGTG CACCGACGAC 
GATAATCCCG GAGTGGTGAT GCCGCCCAAG TTGGAATTGA ACGACCAGTT CGACAGCGAC
AAGAAAGGAT GGACAGCCGG TTTTGCCGAC TATCCCGTGA AAATGGAATC GGACTGGAAG
CTCGAAGAAG GAATCGCAAG TTTGCCGGCT CCGCTCGACA CGAAGAAAAA GGGTTTCCGC
ATTTCGGGTA ACAACCACAG CGACGACCTG TTTATGTATT TCAAAAAGAA AATGACAGGG
CTGAAACCGA ACCAGGAATA TACGGCTGCA TTCACGCTGG AATTTGCGTC CGACGCGCCT
TCGGAAGGCT GGGCGGGCGC TGGCGGCGCG CCGAATGCGG TTAGCGTGGG CATTGGTGCA
GTAGGTGTAG AGCCCAAAAC GACCGTCGAT AGCCAGGAAC ATTACCGCAT GAACATCGAC
AAAATCCAGC AGAAAAGTGA TGGCAAGGAC ATGAAGGTGA TTGGCGACAT TGGCAACGGA
ACCGACAAAT TCGGCTACAA ACTGCTCACC AAAACAGGCG AATTCAAAGG CAAAACCGAC
GCTAGCGGCA ACCTGTGGCT GATTTTCGGA ACCGACTCCG GCTTTGAGGC AACCACGACA
TTGTATTACA CGTCCGTAAA AGTGAAACTT ACCGAAGCAG CAGCGAAATA A
 
Protein sequence
MKKLVLMLGL PFLFLSCTDD DNPGVVMPPK LELNDQFDSD KKGWTAGFAD YPVKMESDWK 
LEEGIASLPA PLDTKKKGFR ISGNNHSDDL FMYFKKKMTG LKPNQEYTAA FTLEFASDAP
SEGWAGAGGA PNAVSVGIGA VGVEPKTTVD SQEHYRMNID KIQQKSDGKD MKVIGDIGNG
TDKFGYKLLT KTGEFKGKTD ASGNLWLIFG TDSGFEATTT LYYTSVKVKL TEAAAK