| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0536 |
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| Symbol | |
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| ID | 8224103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 599474 |
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| End bp | 603448 |
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| Gene Length | 3975 bp |
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| Protein Length | 1324 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644928410 |
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| Product | histidine kinase |
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| Protein accession | YP_003084966 |
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| Protein GI | 255034345 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0692259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.421547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCTTT GGGCTTGCAC TTTTGTGCTT TTTGCTAAGG CTTACGGACA AGTTTTTAAG
AATTTTCGAG AAGTTAACGG AGTCCCGTTA TCGAGCACGT TAGGGATCAC TCAGGACAAG
CAGGGTTTCA TGTGGTTTGG CACTGAGGCG GGCCTTTATC GCTACGACGG CAAGACGTTC
ACTGCCTACC AAACCGGTAA AGAGGGCAAT CCTAAATTCA TCAGGGATCT TTCAACCGAT
TCAAAGGGCA ATATATGGAT TGCTTCTATT AGGTCTGGCG TATACATTTA TGAGCCGAAC
ACGGACACTT TCATCAACTT TGACCATGAT CCGGCCAACG CCAATTCTCT CTCCCACAAT
TCGGTCAATT GCGTTATCAC TGACCAAAAA AAACAAACCT GGGCCGGCAC TCAAAATGGG
TTGTCTCGAA TTATAAACGA AAACGGAAAA TTCAGAATAA CACGGCATCT GCAGACGGAA
TTCTTCGGTC AGACTTTGCA GGTAAGGTCG TTGGCCGAGG ATAAAGCCGG CAACATCTGG
GCAGCAACGG GTGATGGTCT GGTCAAAATG CGAAGTGACG GGTCCCGACC CAAGCTATTC
CGAATTCCAT CCTCAAAGCC GCAGATCGAT CTAAGTCAAT TACTTTGTGT TTGCGTGGAC
GAAAGCGGTA TTATATGGCT GGGCAGTAAC GGCACCGGAT TATATCAATT CAATCCTGTT
ACTGAGCAGT TCAAGCTGGT AGAAACGCTC AAAGCGCCCG GTGGCGAACA TCCCCGTGTT
TCCAAAATGT TGCCGGACGG CAAAGGAAAA TACTGGATGG CAACAAACCA GGGACTTGTG
CATTTCGATC CGCTTACGTG GCAAGCGGAT TGGTATGTAA ATCGGCCGGG CGACTCAAAC
AGCCTGGGCA ACACCATGCT CTTCTCGGTA TACCTCGACC GACAAGGCGG CGTATGGTGC
GGCTCCTTCT ATGCCGGCGT CAGCTATTTC CATTCCGATT CTCCTCAATT CGCATCCTGG
CCATTTGCCG TCAATGATTC GCGAAGCAGA TTGTTTTCTA ACGCCTGGCT GGGCAAGGGT
AAAGCAGGAC AAATCTGGGC CGTTTCGGAT AATCTGGATC AACTTCTGGT CTTTGATACT
AAGGGCAATA ATCATTTGGC ATTCAACCTC AAACTTGCGA AAGAGGCTGA TTACTACTCC
TTTTATCTCG ACCAAGATAA CGTATTCTGG TCCGCGGGGA ATTCCCTATT GACCAGTCTG
GATCTTCGTA CCGGCAGCTA TCGACATTAC CCGATTATCG CCGAGGGTGA ATCAGAATTG
GTCAATGCAA GAACCTTCGC AATCTTTACC GATAGCAATG GTCGCTTCTG GATCGGAGGT
TATTACGGGT TGCTTTTGTT CAATCAGAAA CGTGGTGTGT TCACCAGGCA AGCACCCACA
AACATCAGTG TTCGATGTAT TTACGAAGAT TCCATACACA ATATCTGGAT AGGTTGCGCG
AATGAAGTTT ATCGGATTAA TGCAAAAAGC AGTTCTGTTC GTGTACCGAC ATTAGAGAAA
ATATCTGTCG GTCCCGAAAC GACCAACTAC TTTTGGAGGA TAACAGAAGA TCCTTCCGGC
AATATCTGGG CAGCCGGTAC TAACTTACTT TTTCAATATA ATTCTAAAAA CAACAGGTTT
GAGCCCAATG CCGATGTCCC AGGCGGCTAT ATCAAAGATG TTGTAGCGGA TAAGAGGGGC
TATTTATGGT TGAATGCTAC GAACAAGCTA TTGAGATACC ATCCCAAAAA CAGGACGCTT
CAATCTTACG GTTATGGTGA TGGTTTGCCG CAAAATGGCC TATTAATGCA GGGAGCTGGA
ACGACCGACT CCAGGGGGAA TCTTTACTTC GTCACAAATC AGGGAATGTT CTCATTTAAT
CCGGCGGCCA TTTCAATAAG CAAAGACACT AGTCAGCTCA TGCTGACAGC CCTGAAACTG
TACAACAAGG AAGTTGCTAC CGGTGATAGT ACGGGACTTC TGCCCGGACC GCTGTGGAAA
ACAAAAGAAA TCACCTTCCG CCATGATCAG AGTATTTTTA CCATAGAGTT CGCGCTACTA
GATTATGTTC GTTCTGGTCA GCACAAATAC GCGTACAAGA TCGAAGGTAT TGACCGCGAC
TGGAATTATG TTGAGAACCC ATCCGCTACT TATACGAACT TGCCGTCGGG GACTTATACT
TTTCATGTCA ACGCCGCGAA TGGCGACGGT GTCTGGATGA AGAAGTCCGT GGAGCTCCAA
ATCACCATTC TCCCGCCCTG GTGGAAAACC TGGTATGCCT ACCTGGCCTA TATTTTGCTG
CTTGCCGCCA CTGTGTACGC CGTTACCAGG TTTTTCTGGC TACGTAGTTC GTTCCGCAAG
GAAAATGCGC TGAACCAGGT TAAACTCGAC TTCTTCACCA ATGTCTCCCA CGAAATCAGG
ACGCACCTTT CGTTGATTTC AGCGCCTATG CAAAAAGCCT TTCAGCATGC ATACGATGGT
AAAACCGTTG AGCACTATCT CGGATTTGCT AAAAACAGTT CTGATCGTTT ATTACTGCTG
GTCAACGAGT TGCTCGACTT CCGCAAGATC CAGAGCGGCG GGGTGAGGCT GCAGGTCCAG
GAATATGACG TGGTCAAAAT CATGAAAAGC GTCATTGCCG CATTCGAGCA CACCGCAAAA
GAAAAGGACA TTGAAACAAG GTTCGTATGC CCGGACACGC CGGTACTGTT GTGGCTGGAT
TTGGCTCAAA TGCAAAAAGT GTTTTATAAC CTGCTTAGTA ATGCATATAA ATTCACTCCC
GAAGGCGGTA AGGTATCAGT GCGCATTGTG GAAGTGAGCA ATGAGGTAAG CATTGCTGTG
GAGGACAACG GCAAGGGCAT ACCGGCAGAG CATTTGCGGA AACTATTCAC TTATTACTAC
CAGGCGGATT CGGAAAAACC CGGTTACGGG ATCGGGCTGG CGCTTTCCAA GAGCATTGTG
GAACAGCATC GCGGATACCT TACTGCCGAG AGCCGTCTTG AGGGCAACAA CATGCCCGGC
TGTACAACAT TAACGATCCG GATGCTGCGC GAAAACCGGC ACTTTTCTTC CGAGCAAATT
GCACCGAAAA ACAGCGATTA CGTCGGCAGG AAGTTGACGG AAATGGCAGC AAAGTTGCCC
GCCGTGCATA GCGGCGTCTC TGTAAAGAAA ACCAATACGA TCCTGATCGT CGAGGATAAC
GACCAGTTAC GCGTGTTTAT CAGGGAGCTT TTCGAAAGCG AATTCAACAC GTTGGAGGCG
GAAAATGGGC TTCGCGGTTT GCAACTCGCC AATGAGCATC TTCCCGACAT TGTCCTGTCG
GACATTATGA TGCCCGATAT GAACGGTTTG CAGTTGTGCA GCCATTTGAA AAAGAATATT
ACGACTTCAC ATATACCGGT CGTGTTATTA ACGGCAAGGG CACAGAATCA GCAAATTATC
GAAGGGCTCG CTTCGGGTGC TGACGATTAT CTTGTTAAAC CGTTCGATCC GAGGATTCTT
GAATTAAAGG TACGCAACCT GATCCGGCTG CGAGACGATT TGAAAGACCG TTACCGCCAG
TCTGTCTTGG TGGACCATCA GGAGAGCAGA GCCATTGCCC AGGACAAGAA CCAAGAATTC
CTCATTAAAC TTGGCTCACT TGTTAAAGAA CATATTTCCG ACCGCGACTT TGGGGTCAAT
GAGCTTGCTA TGCAGATTGG AATGAGCGTA TCAGCATTGT ATCGAAAATT GAGATCGCTT
ACAGGGCTTA CGATCAACGA TTTCATGAAA ACGATCCGAT TCAATGAAGC GAAAAAGCTA
CTCGATTCGG GAGTTTACAA TGTAAGCGAG GTGAGTGTGA TGATCGGTTT TGACGACAGC
AAGTATTTCA GTACAGAATT CAAAAAGATT TTCGGCCAAA CGCCGACCGA GGCTAAAAAG
GGAAGTGCTC TTTAA
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| Protein sequence | MVLWACTFVL FAKAYGQVFK NFREVNGVPL SSTLGITQDK QGFMWFGTEA GLYRYDGKTF
TAYQTGKEGN PKFIRDLSTD SKGNIWIASI RSGVYIYEPN TDTFINFDHD PANANSLSHN
SVNCVITDQK KQTWAGTQNG LSRIINENGK FRITRHLQTE FFGQTLQVRS LAEDKAGNIW
AATGDGLVKM RSDGSRPKLF RIPSSKPQID LSQLLCVCVD ESGIIWLGSN GTGLYQFNPV
TEQFKLVETL KAPGGEHPRV SKMLPDGKGK YWMATNQGLV HFDPLTWQAD WYVNRPGDSN
SLGNTMLFSV YLDRQGGVWC GSFYAGVSYF HSDSPQFASW PFAVNDSRSR LFSNAWLGKG
KAGQIWAVSD NLDQLLVFDT KGNNHLAFNL KLAKEADYYS FYLDQDNVFW SAGNSLLTSL
DLRTGSYRHY PIIAEGESEL VNARTFAIFT DSNGRFWIGG YYGLLLFNQK RGVFTRQAPT
NISVRCIYED SIHNIWIGCA NEVYRINAKS SSVRVPTLEK ISVGPETTNY FWRITEDPSG
NIWAAGTNLL FQYNSKNNRF EPNADVPGGY IKDVVADKRG YLWLNATNKL LRYHPKNRTL
QSYGYGDGLP QNGLLMQGAG TTDSRGNLYF VTNQGMFSFN PAAISISKDT SQLMLTALKL
YNKEVATGDS TGLLPGPLWK TKEITFRHDQ SIFTIEFALL DYVRSGQHKY AYKIEGIDRD
WNYVENPSAT YTNLPSGTYT FHVNAANGDG VWMKKSVELQ ITILPPWWKT WYAYLAYILL
LAATVYAVTR FFWLRSSFRK ENALNQVKLD FFTNVSHEIR THLSLISAPM QKAFQHAYDG
KTVEHYLGFA KNSSDRLLLL VNELLDFRKI QSGGVRLQVQ EYDVVKIMKS VIAAFEHTAK
EKDIETRFVC PDTPVLLWLD LAQMQKVFYN LLSNAYKFTP EGGKVSVRIV EVSNEVSIAV
EDNGKGIPAE HLRKLFTYYY QADSEKPGYG IGLALSKSIV EQHRGYLTAE SRLEGNNMPG
CTTLTIRMLR ENRHFSSEQI APKNSDYVGR KLTEMAAKLP AVHSGVSVKK TNTILIVEDN
DQLRVFIREL FESEFNTLEA ENGLRGLQLA NEHLPDIVLS DIMMPDMNGL QLCSHLKKNI
TTSHIPVVLL TARAQNQQII EGLASGADDY LVKPFDPRIL ELKVRNLIRL RDDLKDRYRQ
SVLVDHQESR AIAQDKNQEF LIKLGSLVKE HISDRDFGVN ELAMQIGMSV SALYRKLRSL
TGLTINDFMK TIRFNEAKKL LDSGVYNVSE VSVMIGFDDS KYFSTEFKKI FGQTPTEAKK
GSAL
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