| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0444 |
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| Symbol | |
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| ID | 8224010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 505492 |
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| End bp | 506820 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 644928321 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_003084878 |
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| Protein GI | 255034257 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0474351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAG TCGCTTTTTA TACATTAGGG TGCAAGCTGA ACTACTCGGA GAGCTCTTCC
ATCGGACGGA TGTTCGAGGA TAAGGGGTAT ACCAAAGTAG AATTCAACGA AAACCCGGAC
ATTTTTATCA TCAACACCTG CTCGGTAACC GAGAATGCGG ATAAGAAATG CCGCAAAATC
GTACGCGAGG CCCAGAAAAT CAATGCGGAC GGATACGTGG CGATCATTGG CTGCTATGCC
CAGCTGAAAC CGAAAGAGAT TTCCGAGATT CCGGGGGTGG ATGCGGTTTT GGGCGCTGCC
GAGAAATTCA GGCTTGTCGA ACTGATCGAT ACATTCGAGA AAGCCCCCTC GGGCCAGCCC
GCGCAGGTGA TCGCCTCGAC GATCGACCAT GCGGTGGAAT ACCACACGTC CTACTCGCTC
AACGACCGCA CGCGCACATT CCTGAAAGTG CAGGACGGCT GCGACTACCC GTGCGCCTAT
TGCACGATCC CACTCGCACG GGGCAAGAGC CGGTCGGATA GCATCGAAAA CATCGTGAAA
GCCGCCCGCG ACATTGCTGC GCGGGACGTT AAGGAAATCG TGCTTACGGG TGTGAATATC
GGCGATTTCG GGCTGCGGAA TGGCGTGCGC GAGGAAACTT TCCTGGACCT GGTGAAGGCA
TTGGATGAGG TGGAAGGCAT TGAACGCTTC CGCATTTCGT CCATTGAACC CAATTTACTG
ACCGACGAAA TCATTGAATT TGTAGCGCAA TCCAAACGTT TCGCGCCGCA TTTCCATATT
CCGCTGCAAT CGGGCTCGAA CAAGGTTTTG GGACTGATGA AGCGCCGCTA CAAACGCGAG
CTCTATACCG AGCGCGTGGC AAAAATCAAA TCGCTCATGC CCGACTGCTG CATTGGCGTG
GACGTGATCG TAGGCCACCC GGGCGAAACG AAAGAGCTTT TTGAAGAAAC CTACCACTTC
CTGAATGAAC TGGAAGTGTC GTACCTGCAC GTATTCACCT ACTCCGAGCG CGAAAACACG
GCCGCATTAG CCATCCGCCC GATCGTCAAC AAAGGCGAAC GCGCTGAACG CTCGAAAATG
CTGCACATTT TGTCCGACAA AAAGAAGCGC TTTTTCTACG AAACGCAGAT CGGCAAGGAA
GGCAAAGTAT TGTTTGAAGA TGAGGTGCAG AACGGCCAGA TGCTCGGCTT CACAGGGAAT
TACGTGCGCG TGGCCGTGAA ATACGACCCG CTGCTGATTA ACGAAACAAA AGAAGTGCGC
TACGACCACA TCAATGCGGA AGGCCTGATG GAAGTCACTG AAATACACGA AGAGATATTA
ACGCACTAA
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| Protein sequence | MKKVAFYTLG CKLNYSESSS IGRMFEDKGY TKVEFNENPD IFIINTCSVT ENADKKCRKI
VREAQKINAD GYVAIIGCYA QLKPKEISEI PGVDAVLGAA EKFRLVELID TFEKAPSGQP
AQVIASTIDH AVEYHTSYSL NDRTRTFLKV QDGCDYPCAY CTIPLARGKS RSDSIENIVK
AARDIAARDV KEIVLTGVNI GDFGLRNGVR EETFLDLVKA LDEVEGIERF RISSIEPNLL
TDEIIEFVAQ SKRFAPHFHI PLQSGSNKVL GLMKRRYKRE LYTERVAKIK SLMPDCCIGV
DVIVGHPGET KELFEETYHF LNELEVSYLH VFTYSERENT AALAIRPIVN KGERAERSKM
LHILSDKKKR FFYETQIGKE GKVLFEDEVQ NGQMLGFTGN YVRVAVKYDP LLINETKEVR
YDHINAEGLM EVTEIHEEIL TH
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