Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0409 |
Symbol | |
ID | 8223975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 469222 |
End bp | 469950 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644928286 |
Product | lipolytic protein G-D-S-L family |
Protein accession | YP_003084843 |
Protein GI | 255034222 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2755] Lysophospholipase L1 and related esterases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.252597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCAGCA AAACAGTATA TAAGGGCATG AAAGTATATC AAATAGCAAT CCTGCTTTGC ATGCTGGCTT GCGGCGGCAC ACAAAGCCCC GGACCATCGG CTCCCGCCGG CACTGACCCG ATTGAAGAAT CGGGCAAGCC GCAATACCTG GCCCTGGGCG ATTCCTATAC GATCGGGCAG AGTGTGGCGC CCGACGAGCG GTGGCCTGTG ATATTGGCAG ACGAACTCAA AAAAGCGGGC AAGCCAGTGG CCACGCCGAA GATCGTCGCC CGCACGGGCT GGACCACGCG CAACTTGCTC GACGCATTAG AACAGAGCCC TCCCACCGGC ACGTTCGACC TTGTGTCGTT GCTTATCGGC GTAAATAACC AGTACCAGGG CAGAAATAAG GAAGAATACC GGATCGAATT CCGACAGCTT TTGCAGCAGG CGATTGCGTA CGCCGGCGAC GATGCCGGTA ATTTATTCGT GCTATCCATT CCCGATTGGG GCGTTACCGC CATCGGCGAA GGCAACCGTG AGCACATAGC CGCCGAAATC GACAGCTTCA ACGCCATTGC GAAGGAGGAA TGCCAGAAAC TCAAAATCGT TTTCATCGAC ATTACACCAA TATCCCGCAA AGCACTCAAC GACCCTACGA TGATTGCGAG CGACCAGCTG CATTTCTCGG GCAAAATGTA CCGGCTATGG GTGAATGAAG CCCTTCCGAG GGTGAGGCAG CTGTTTTAG
|
Protein sequence | MGSKTVYKGM KVYQIAILLC MLACGGTQSP GPSAPAGTDP IEESGKPQYL ALGDSYTIGQ SVAPDERWPV ILADELKKAG KPVATPKIVA RTGWTTRNLL DALEQSPPTG TFDLVSLLIG VNNQYQGRNK EEYRIEFRQL LQQAIAYAGD DAGNLFVLSI PDWGVTAIGE GNREHIAAEI DSFNAIAKEE CQKLKIVFID ITPISRKALN DPTMIASDQL HFSGKMYRLW VNEALPRVRQ LF
|
| |