Gene Dfer_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0401 
Symbol 
ID8223967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp459767 
End bp460930 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content54% 
IMG OID644928278 
Productputative RNA methylase 
Protein accessionYP_003084835 
Protein GI255034214 
COG category[L] Replication, recombination and repair 
COG ID[COG0116] Predicted N6-adenine-specific DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTAT TCAAATCCCC CGCCCCCATC ACCATTACCT GTTACAAACG CCTCGCGCCA 
TTCCTTGAAA AAGAGGTGGC ACAGCTCGGT TACCGGGTGG AGGAAACATT TGCGACCGGT
GTGCAGCTGC GCGGTACGAT CAACGACTGC ATTAAACTGA ACCTGAACCT GTATTGCGCC
AGCCAGGTGC TTTACAGCCT CGGCACATTC AGCGCGCGGC ATCCCGACGA TGTTTACCGG
TTTTTATCCC AAATGAAATG GGAGGACATA CTGGCCGAAG ACGCCTATTT CTCGGTGACC
AGCAACGTGA TGACGGCCAC TGTGAACAAC ACCATGTTTG CGAACCTGCG TGTGAAGGAT
GCGATCGTGG ACCGGCTGCG CGACAAAAAA GGCGTGCGGC CGTCGACCGG CTCGGAGCTG
AAAGGTGCCG TGGTGCATTT GTTCTGGAAG GACGAGCGGG CGGAAGTGTT CATTGATACT
TCGGGCGAAA CGGTGGCGCG GCACGGTTAC CGCAAAATCC CCGGCCAGGC ACCAATGCTC
GAATCGCTGG CTTCGGCCAC GATCCTGGCG AGCCAGTGGG ACCGGAACTC TGCGTTCATC
AACCCCATGT GCGGCTCGGG CACGCTCGCG ATCGAAGCGG CGCTCATCGC CACCAACAGC
CGCCCGGGGC TTTTCAGGGA CAATTATTCG TTCATGCATT TGCTCGGGTA TGATGAGGAA
GTGTATTTCG AAGCACAGGA CAAGCTGGAA GCGCAGATCA TCGAAGCGCC GAAACTTCGC
ATTATCGCAA CAGATCACGA TCCGAATGCG GTTACGAATG CTAAAAAGAA CGCAATAGCC
GCCGGTGTGG CCGATATGAT CGAGTTCGGC GTCTGCGACT TTGCCGACAC CGAAGTGCCG
CAGGAGAACA AGGGCGTCTT TTTCGTAAAC CCCGAGTACG GCGAACGACT CGGAGAAATA
GGCGAACTTG AAGAAACTTA TGGACGAATT GGTGATTTTA TGAAACAGAA GTGTGGAGGA
TATTACGGAT ATATCTTCAC CGGAAACCTG GATCTTGCCA AGAAAATCGG CCTGAAAGCC
AAGCGACGGA TTGAGTTTTA TTCCGGAAAA ATCGATTGTC GCCTGCTGGA ATACGAGCTC
TACGAGGGTT CGAGAAGGAA TTAG
 
Protein sequence
MSLFKSPAPI TITCYKRLAP FLEKEVAQLG YRVEETFATG VQLRGTINDC IKLNLNLYCA 
SQVLYSLGTF SARHPDDVYR FLSQMKWEDI LAEDAYFSVT SNVMTATVNN TMFANLRVKD
AIVDRLRDKK GVRPSTGSEL KGAVVHLFWK DERAEVFIDT SGETVARHGY RKIPGQAPML
ESLASATILA SQWDRNSAFI NPMCGSGTLA IEAALIATNS RPGLFRDNYS FMHLLGYDEE
VYFEAQDKLE AQIIEAPKLR IIATDHDPNA VTNAKKNAIA AGVADMIEFG VCDFADTEVP
QENKGVFFVN PEYGERLGEI GELEETYGRI GDFMKQKCGG YYGYIFTGNL DLAKKIGLKA
KRRIEFYSGK IDCRLLEYEL YEGSRRN